RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CYP21A2P08686 494 aa22.4■■□□□ 1.18
LIMD2-209ENST00000580222 ADGRD2Q7Z7M1 963 aa22.4■■□□□ 1.18
LIMD2-209ENST00000580222 IL31RAQ8NI17 732 aa22.4■■□□□ 1.18
LIMD2-209ENST00000580222 TTC14Q96N46 770 aa22.4■■□□□ 1.18
LIMD2-209ENST00000580222 ZKSCAN3Q9BRR0 538 aa22.4■■□□□ 1.18
LIMD2-209ENST00000580222 C11orf84Q9BUA3 381 aaPredicted RBP22.4■■□□□ 1.18
LIMD2-209ENST00000580222 RNF41Q9H4P4 317 aaPredicted RBP22.4■■□□□ 1.18
LIMD2-209ENST00000580222 ATG2AQ2TAZ0 1938 aa22.39■■□□□ 1.18
LIMD2-209ENST00000580222 SLC27A2O14975 620 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 QRICH1Q2TAL8 776 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 RNF20Q5VTR2 975 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 CREB3L3Q68CJ9 461 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 SUGP1Q8IWZ8 645 aaKnown RBP22.39■■□□□ 1.17
LIMD2-209ENST00000580222 CLP1Q92989 425 aaKnown RBP22.39■■□□□ 1.17
LIMD2-209ENST00000580222 SETD4Q9NVD3 440 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 TELO2Q9Y4R8 837 aa22.39■■□□□ 1.17
LIMD2-209ENST00000580222 H3BRB1 525 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 MYCLP12524 364 aaPredicted RBP22.38■■□□□ 1.17
LIMD2-209ENST00000580222 UBA1P22314 1058 aaKnown RBP22.38■■□□□ 1.17
LIMD2-209ENST00000580222 CBX2Q14781 532 aaPredicted RBP22.38■■□□□ 1.17
LIMD2-209ENST00000580222 NECTIN1Q15223 517 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 GPATCH4Q5T3I0 446 aaKnown RBP22.38■■□□□ 1.17
LIMD2-209ENST00000580222 MFSD6Q6ZSS7 791 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 MCF2L2Q86YR7 1114 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 ASIC4Q96FT7 647 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 PDCD2LQ9BRP1 358 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 MAF1Q9H063 256 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 TUT1Q9H6E5 874 aaKnown RBP22.38■■□□□ 1.17
LIMD2-209ENST00000580222 PLAGL2Q9UPG8 496 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 DCHS1Q96JQ0 3298 aa22.38■■□□□ 1.17
LIMD2-209ENST00000580222 VPS13AQ96RL7 3174 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 SEC24BO95487 1268 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 CFBP00751 764 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 CHRNA1P02708 482 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 MMP1P03956 469 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 PCP11498 1178 aaKnown RBP22.37■■□□□ 1.17
LIMD2-209ENST00000580222 NDUFV1P49821 464 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 SMRP1Q8NCR6 262 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 PRRX2Q99811 253 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 USP26Q9BXU7 913 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 JMJD4Q9H9V9 463 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 VAT1LQ9HCJ6 419 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 PCDHGC5Q9Y5F6 944 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 WDR87Q6ZQQ6 2873 aa22.37■■□□□ 1.17
LIMD2-209ENST00000580222 NEDD4P46934 1319 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 ADGRA3Q8IWK6 1321 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 LGALS2P05162 132 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 AVPR2P30518 371 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 HSD17B4P51659 736 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 PKN1Q16512 942 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 FAM26DQ5JW98 314 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 VSIG10LQ86VR7 867 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 ZNF689Q96CS4 500 aaPredicted RBP22.36■■□□□ 1.17
LIMD2-209ENST00000580222 MRPL11Q9Y3B7 192 aaKnown RBP22.36■■□□□ 1.17
LIMD2-209ENST00000580222 CACNA1AO00555 2505 aa22.36■■□□□ 1.17
LIMD2-209ENST00000580222 PTPRZ1P23471 2315 aaPredicted RBP22.36■■□□□ 1.17
LIMD2-209ENST00000580222 ENPP3O14638 875 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 GLP2RO95838 553 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 HSPA4P34932 840 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 ADAM17P78536 824 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 ATOH1Q92858 354 aaPredicted RBP22.35■■□□□ 1.17
LIMD2-209ENST00000580222 APBB2Q92870 758 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 BARX2Q9UMQ3 279 aaPredicted RBP22.35■■□□□ 1.17
LIMD2-209ENST00000580222 USP15Q9Y4E8 981 aaPredicted RBP22.35■■□□□ 1.17
LIMD2-209ENST00000580222 KIAA1217Q5T5P2 1943 aa22.35■■□□□ 1.17
LIMD2-209ENST00000580222 E7EWF7 191 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 H0Y858 1186 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 PPP1R11O60927 126 aaPredicted RBP22.34■■□□□ 1.17
LIMD2-209ENST00000580222 CAND2O75155 1236 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 PDGFBP01127 241 aaPredicted RBP22.34■■□□□ 1.17
LIMD2-209ENST00000580222 GHRP10912 638 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 HOXA13P31271 388 aaPredicted RBP22.34■■□□□ 1.17
LIMD2-209ENST00000580222 RBM10P98175 930 aaKnown RBP22.34■■□□□ 1.17
LIMD2-209ENST00000580222 COASYQ13057 564 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 TRDNQ13061 729 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 STOX1Q6ZVD7 989 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 ASCL5Q7RTU5 278 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 RALYLQ86SE5 291 aaKnown RBP22.34■■□□□ 1.17
LIMD2-209ENST00000580222 TRIM50Q86XT4 487 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 SPPL3Q8TCT6 385 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 CNNM2Q9H8M5 875 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 TLR9Q9NR96 1032 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 TAF6LQ9Y6J9 622 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 NLRC5Q86WI3 1866 aa22.34■■□□□ 1.17
LIMD2-209ENST00000580222 ITGB1P05556 798 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 SIGLEC14Q08ET2 396 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 BTG3Q14201 252 aaPredicted RBP22.33■■□□□ 1.17
LIMD2-209ENST00000580222 PGM5Q15124 567 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 RUFY4Q6ZNE9 571 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 RBM23Q86U06 439 aaKnown RBP22.33■■□□□ 1.17
LIMD2-209ENST00000580222 EFHBQ8N7U6 833 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 PNMA1Q8ND90 353 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 ESR2Q92731 530 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 RPGRIP1Q96KN7 1286 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 KRT23Q9C075 422 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 EHMT1Q9H9B1 1298 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 MLXIPQ9HAP2 919 aa22.33■■□□□ 1.17
LIMD2-209ENST00000580222 UPF2Q9HAU5 1272 aaKnown RBP22.33■■□□□ 1.17
LIMD2-209ENST00000580222 MRPL42Q9Y6G3 142 aaKnown RBP22.33■■□□□ 1.17
LIMD2-209ENST00000580222 NRIP1P48552 1158 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms