RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PCDHB15Q9Y5E8 787 aa14.16□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TTC3P53804 2025 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ZNF292O60281 2723 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 OPLAHO14841 1288 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 GRM6O15303 877 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SORBS3O60504 671 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 EYA4O95677 639 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ADAM15Q13444 863 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 CLUL1Q15846 466 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 TRIM67Q6ZTA4 783 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 RSPH3Q86UC2 560 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 P2RX5Q93086 422 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 KRT23Q9C075 422 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 IRF2BPLQ9H1B7 796 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 SETD4Q9NVD3 440 aa14.15□□□□□ -0.14
CDK5RAP3-216ENST00000579853 NRCAMQ92823 1304 aa14.15□□□□□ -0.15
CDK5RAP3-216ENST00000579853 KLRF2D3W0D1 207 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 RPLP2P05387 115 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 HOXA13P31271 388 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ICAM3P32942 547 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 NDUFV1P49821 464 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ADAM17P78536 824 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 DLX2Q07687 328 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 BTG3Q14201 252 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 MTMR8Q96EF0 704 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 RC3H2Q9HBD1 1191 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 GVINP1Q7Z2Y8 2422 aa14.14□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 M0R296 226 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 TBX10O75333 385 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LINC00271P0C7V0 271 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 IFIT1BQ5T764 474 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CYFIP1Q7L576 1253 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 IL31RAQ8NI17 732 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ZNF689Q96CS4 500 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 INPP4AQ96PE3 977 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SENP7Q9BQF6 1050 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 EHMT1Q9H9B1 1298 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ZSWIM5Q9P217 1185 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PLAGL2Q9UPG8 496 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ATG2AQ2TAZ0 1938 aa14.13□□□□□ -0.15
CDK5RAP3-216ENST00000579853 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FSD2A1L4K1 749 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 B4E1Z4 1266 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FIBPO43427 364 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CHRNA1P02708 482 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 COASYQ13057 564 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 IMMTQ16891 758 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FCHSD1Q86WN1 690 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FBXL6Q8N531 539 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 EFHBQ8N7U6 833 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SMRP1Q8NCR6 262 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 GIMAP8Q8ND71 665 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PRSS33Q8NF86 280 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 MSLNLQ96KJ4 702 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 GPR20Q99678 358 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 OSBPL7Q9BZF2 842 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LAMA4Q16363 1823 aa14.12□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SPATA31C2B4DYI2 1134 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ENPP3O14638 875 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PPP1R11O60927 126 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 DGKIO75912 1065 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 GHRP10912 638 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ZXDAP98168 799 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FOXK2Q01167 660 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CBX2Q14781 532 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FAM43BQ6ZT52 329 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 STAG2Q8N3U4 1231 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 GPKOWQ92917 476 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 RILPL2Q969X0 211 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FTHL17Q9BXU8 183 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 ALG13Q9NP73 1137 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 MAD2L2Q9UI95 211 aa14.11□□□□□ -0.15
CDK5RAP3-216ENST00000579853 STAG3L1P0CL83 205 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SDSP20132 328 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SIGLEC14Q08ET2 396 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LPIN1Q14693 890 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 UTP14CQ5TAP6 766 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 HOMER1Q86YM7 354 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 CMTR2Q8IYT2 770 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 DSCC1Q9BVC3 393 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 SQORQ9Y6N5 450 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 FRMPD4Q14CM0 1322 aa14.1□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PNMA6FA0A0J9YX94 578 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 HIP1O00291 1037 aa14.09□□□□□ -0.15
CDK5RAP3-216ENST00000579853 LINC01565O15544 149 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms