RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
SSH2-208ENST00000579040 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.3
SSH2-208ENST00000579040 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.3
SSH2-208ENST00000579040 NCOR1O75376 2440 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
SSH2-208ENST00000579040 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
SSH2-208ENST00000579040 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
SSH2-208ENST00000579040 CDC27P30260 824 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 METAP2P50579 478 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSH2-208ENST00000579040 DEFB103AP81534 67 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 TAP1Q03518 808 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
SSH2-208ENST00000579040 JAKMIP1Q96N16 626 aaKnown RBP13.2□□□□□ -0.3
SSH2-208ENST00000579040 MXRA8Q9BRK3 442 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 ZBED2Q9BTP6 218 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 UNC80Q8N2C7 3258 aa13.2□□□□□ -0.3
SSH2-208ENST00000579040 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 NFASCO94856 1347 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 CDH23Q9H251 3354 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 GJB5O95377 273 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 PSMA5P28066 241 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 SREBF1P36956 1147 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 TAF2Q6P1X5 1199 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 Q6ZUG5 572 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 RAD9AQ99638 391 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 SMARCAD1Q9H4L7 1026 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 JPH1Q9HDC5 661 aaPredicted RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 THEGQ9P2T0 379 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
SSH2-208ENST00000579040 TELO2Q9Y4R8 837 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
SSH2-208ENST00000579040 ESYT2A0FGR8 921 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 AMHP03971 560 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
SSH2-208ENST00000579040 SCG2P13521 617 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
SSH2-208ENST00000579040 APOBRQ0VD83 1088 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 PPFIA1Q13136 1202 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
SSH2-208ENST00000579040 PPM1EQ8WY54 764 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 SEPT8Q92599 483 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 GLG1Q92896 1179 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 BRF1Q92994 677 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
SSH2-208ENST00000579040 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
SSH2-208ENST00000579040 RALGAPA2Q2PPJ7 1873 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
SSH2-208ENST00000579040 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 CTSHP09668 335 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 CPA1P15085 419 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
SSH2-208ENST00000579040 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
SSH2-208ENST00000579040 GRIK4Q16099 956 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 RSPH3Q86UC2 560 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 ARNTL2Q8WYA1 636 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 APBB2Q92870 758 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
SSH2-208ENST00000579040 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 AZI2Q9H6S1 392 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 TUBE1Q9UJT0 475 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
SSH2-208ENST00000579040 BRWD1Q9NSI6 2320 aa13.16□□□□□ -0.3
SSH2-208ENST00000579040 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
SSH2-208ENST00000579040 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
SSH2-208ENST00000579040 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
SSH2-208ENST00000579040 MEIS1O00470 390 aa13.16□□□□□ -0.3
SSH2-208ENST00000579040 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
SSH2-208ENST00000579040 NEFLP07196 543 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms