RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 KLF18A0A0U1RQI7 1052 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 UPP2O95045 317 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 KCNA2P16389 499 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ITGB5P18084 799 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TFF2Q03403 129 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GRB10Q13322 594 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 DHX32Q7L7V1 743 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ADAMTS19Q8TE59 1207 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 LMBR1Q8WVP7 490 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SEPT1Q8WYJ6 367 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SEPT8Q92599 483 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GLG1Q92896 1179 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CHD7Q9P2D1 2997 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TET1Q8NFU7 2136 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TNFRSF10AO00220 468 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CAND2O75155 1236 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 HOXC8P31273 242 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ADCY7P51828 1080 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 IGBP1P78318 339 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PPFIA1Q13136 1202 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 KRT32Q14532 448 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TGS1Q96RS0 853 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 OSBPL7Q9BZF2 842 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 DOCK5Q9H7D0 1870 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 JADE2Q9NQC1 790 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ERAP1Q9NZ08 941 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 UBIAD1Q9Y5Z9 338 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PTPRSQ13332 1948 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GSTTP1A0A1W2PQM5 241 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SMCO2A6NFE2 343 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GHRP10912 638 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CPA1P15085 419 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ZNF76P36508 570 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 EXOSC10Q01780 885 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GRIK4Q16099 956 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 AAK1Q2M2I8 961 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RUFY4Q6ZNE9 571 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SDF4Q9BRK5 362 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 C17orf80Q9BSJ5 609 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 IFIH1Q9BYX4 1025 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TMEM260Q9NX78 707 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SLC9A2Q9UBY0 812 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TUBE1Q9UJT0 475 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-211ENST00000578996 hCG_1984214I3L0E3 225 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 DDX39AO00148 427 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 STXBP3O00186 592 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MAFGO15525 162 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 LPXNO60711 386 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 POU3F3P20264 500 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CDC27P30260 824 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 KCNQ1P51787 676 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 APOBRQ0VD83 1088 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 Q6ZUG5 572 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ZNF713Q8N859 430 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FBXO22Q8NEZ5 403 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CYP2W1Q8TAV3 490 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 DNAJB3Q8WWF6 145 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 APBB2Q92870 758 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MXRA8Q9BRK3 442 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FOSP01100 380 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ARP10275 920 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ACTR2P61160 394 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ERVK-21P61565 698 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ADAM17P78536 824 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 FUT2Q10981 343 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 CEP55Q53EZ4 464 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 JAKMIP3Q5VZ66 844 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
CDK5RAP3-211ENST00000578996 BLOC1S2Q6QNY1 142 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms