RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FAM184AQ8NB25 1140 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 TBCKQ8TEA7 893 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 GTF3C6Q969F1 213 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SCLYQ96I15 445 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ZSCAN31Q96LW9 406 aaPredicted RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 AIFM3Q96NN9 605 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 C16orf70Q9BSU1 422 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 AGO4Q9HCK5 861 aaKnown RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 IL23AQ9NPF7 189 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SETD4Q9NVD3 440 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ERAP1Q9NZ08 941 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 GTF2IRD1Q9UHL9 959 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 TRPC6Q9Y210 931 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 NID2Q14112 1375 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 GSTTP1A0A1W2PQM5 241 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 PITPNM1O00562 1244 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 HOXD8P13378 290 aaPredicted RBP7.43□□□□□ -1.22
TRAF4-213ENST00000578917 RFC2P35250 354 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 STAT5BP51692 787 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF200P98182 395 aaPredicted RBP7.43□□□□□ -1.22
TRAF4-213ENST00000578917 SETQ01105 290 aaPredicted RBP7.43□□□□□ -1.22
TRAF4-213ENST00000578917 PPFIA1Q13136 1202 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 RABEP1Q15276 862 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 SWSAP1Q6NVH7 229 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 RSPH3Q86UC2 560 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 SESTD1Q86VW0 696 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 CCDC83Q8IWF9 413 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 DEFB123Q8N688 67 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 CAGE1Q8TC20 777 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 AFAP1L1Q8TED9 768 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 LRCH3Q96II8 777 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.43□□□□□ -1.223e-10■□□□□ 10.1
TRAF4-213ENST00000578917 RNPEPQ9H4A4 650 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 SLC4A7Q9Y6M7 1214 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 NRCAMQ92823 1304 aa7.43□□□□□ -1.22
TRAF4-213ENST00000578917 MCM3APO60318 1980 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 POTEB3A0JP26 581 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 RSPH10B2B2RC85 870 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 HAS3O00219 553 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 ADAMTS3O15072 1205 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 TREHO43280 583 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 CHMP2AO43633 222 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 CCNT1O60563 726 aaKnown RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 GAS7O60861 476 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 BAG4O95429 457 aaKnown RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PARNO95453 639 aaKnown RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 CTDNEP1O95476 244 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PSAPP07602 524 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PFKMP08237 780 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 IQCF3P0C7M6 154 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 RSPH10BP0C881 870 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 CKBP12277 381 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 SELPP16109 830 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 KRT2P35908 639 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 KRT76Q01546 638 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 ITGB3BPQ13352 177 aaPredicted RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 INF2Q27J81 1249 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 LETM2Q2VYF4 491 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 LRCH2Q5VUJ6 765 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PDXDC2PQ6P474 469 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 POTEBQ6S5H4 581 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PIK3AP1Q6ZUJ8 805 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 LRRC8DQ7L1W4 858 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 C16orf59Q7L2K0 433 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 IL17RAQ96F46 866 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 NAP1L4Q99733 375 aaKnown RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 PHF20Q9BVI0 1012 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 WNT8AQ9H1J5 351 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF302Q9NR11 478 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 SH2B1Q9NRF2 756 aaPredicted RBP7.42□□□□□ -1.22
TRAF4-213ENST00000578917 GJB4Q9NTQ9 266 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 MSRAQ9UJ68 235 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 TELO2Q9Y4R8 837 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 NFASCO94856 1347 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 STK36Q9NRP7 1315 aa7.42□□□□□ -1.22
TRAF4-213ENST00000578917 IGLV3-22A0A075B6J6 115 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 MSH4O15457 936 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 JAK2O60674 1132 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 LARGE1O95461 756 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 CTSHP09668 335 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 INSRRP14616 1297 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 ATP2B1P20020 1258 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 CIITAP33076 1130 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 KCNJ6P48051 423 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 SLC26A2P50443 739 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 SMAD3P84022 425 aaKnown RBP7.41□□□□□ -1.22
TRAF4-213ENST00000578917 IKBKEQ14164 716 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 GRIK4Q16099 956 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF618Q5T7W0 954 aa7.41□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF746Q6NUN9 644 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms