RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 ADCK5Q3MIX3 580 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 FAM117BQ6P1L5 589 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 RAD9AQ99638 391 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 BRPF3Q9ULD4 1205 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 UBIAD1Q9Y5Z9 338 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
RN7SL560P-201ENST00000577943 SPTBN5Q9NRC6 3674 aaKnown RBP17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 CAND2O75155 1236 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 POU3F3P20264 500 aaPredicted RBP17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 PLEKHG4Q58EX7 1191 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 MYOCDQ8IZQ8 938 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 TTC28Q96AY4 2481 aa17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 MYH9P35579 1960 aaKnown RBP17.11■□□□□ 0.33
RN7SL560P-201ENST00000577943 NCOR1O75376 2440 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 MAFGO15525 162 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 AMHP03971 560 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 ADAM17P78536 824 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 FGD1P98174 961 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 GRB10Q13322 594 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 KRT40Q6A162 431 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 SEPT8Q92599 483 aa17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 V9GY48 417 aaPredicted RBP17.1■□□□□ 0.33
RN7SL560P-201ENST00000577943 EVPLQ92817 2033 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 MUC3AQ02505 3323 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 GSTTP1A0A1W2PQM5 241 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 MARK3P27448 753 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 ADCY7P51828 1080 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 PPP1R18Q6NYC8 613 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 GLG1Q92896 1179 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 RIC8AQ9NPQ8 531 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 MTUS1Q9ULD2 1270 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 INSL6Q9Y581 213 aa17.09■□□□□ 0.33
RN7SL560P-201ENST00000577943 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.33
RN7SL560P-201ENST00000577943 LINC01553A4QN01 128 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 FUT2Q10981 343 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 GDPD5Q8WTR4 605 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 JPH1Q9HDC5 661 aaPredicted RBP17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 WDR81Q562E7 1941 aa17.08■□□□□ 0.32
RN7SL560P-201ENST00000577943 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 STXBP3O00186 592 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 TNFRSF10AO00220 468 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 LPXNO60711 386 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 CDC27P30260 824 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 ERVK-21P61565 698 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 TEX2Q8IWB9 1127 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 ADAMTS19Q8TE59 1207 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 APBB2Q92870 758 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 KCNH7Q9NS40 1196 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 SLC9A2Q9UBY0 812 aa17.07■□□□□ 0.32
RN7SL560P-201ENST00000577943 RALGAPA2Q2PPJ7 1873 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 UPP2O95045 317 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 CPA1P15085 419 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 RCAN1P53805 252 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 TFF2Q03403 129 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 GRIK4Q16099 956 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 RUFY4Q6ZNE9 571 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 Q6ZUG5 572 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
RN7SL560P-201ENST00000577943 GLT8D2Q9H1C3 349 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms