RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 PPP2CAP67775 309 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 SMAD2Q15796 467 aaKnown RBP4.25□□□□□ -1.73
CDH8-204ENST00000577536 PHF19Q5T6S3 580 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 ASXL2Q76L83 1435 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 DPH6Q7L8W6 267 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.25□□□□□ -1.73
CDH8-204ENST00000577536 SPATA9Q9BWV2 254 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 BARX1Q9HBU1 254 aaPredicted RBP4.25□□□□□ -1.73
CDH8-204ENST00000577536 ST6GALNAC2Q9UJ37 374 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 DSEQ9UL01 958 aa4.25□□□□□ -1.73
CDH8-204ENST00000577536 NPEPPSL1A6NEC2 478 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 STK10O94804 968 aaKnown RBP4.24□□□□□ -1.73
CDH8-204ENST00000577536 KLHL18O94889 574 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 CKMP06732 381 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 TNFRSF1AP19438 455 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 SKIDA1Q1XH10 827 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 CD276Q5ZPR3 534 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 KCTD1Q719H9 257 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 CKAP2LQ8IYA6 745 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 NUDT10Q8NFP7 164 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 DVL3Q92997 716 aaPredicted RBP4.24□□□□□ -1.73
CDH8-204ENST00000577536 NUDT11Q96G61 164 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ALG1Q9BT22 464 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 IPPKQ9H8X2 491 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ZFP69BQ9UJL9 534 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ADAM29Q9UKF5 820 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ZDHHC9Q9Y397 364 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 MSRB2Q9Y3D2 182 aa4.24□□□□□ -1.73
CDH8-204ENST00000577536 ZNF839A8K0R7 811 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 MATN3O15232 486 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 GPR42O15529 346 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 PDPK1O15530 556 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 B4GALT4O60513 344 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 FBXO21O94952 628 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 KNG1P01042 644 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 ENO2P09104 434 aaPredicted RBP4.23□□□□□ -1.73
CDH8-204ENST00000577536 GLRBP48167 497 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 PFKPQ01813 784 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 ICAM4Q14773 271 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 SLFN13Q68D06 897 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 Q6ZUG5 572 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 SPATC1Q76KD6 591 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 CIR1Q86X95 450 aaPredicted RBP4.23□□□□□ -1.73
CDH8-204ENST00000577536 STPG3Q8N7X2 389 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 CD248Q9HCU0 757 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 JADE2Q9NQC1 790 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 KCND1Q9NSA2 647 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 ARHGAP20Q9P2F6 1191 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
CDH8-204ENST00000577536 OVOL3O00110 214 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 ACOT7O00154 380 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 U2SURPO15042 1029 aaKnown RBP4.22□□□□□ -1.73
CDH8-204ENST00000577536 ADCY3O60266 1144 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 ZC3H6P61129 1189 aaKnown RBP4.22□□□□□ -1.73
CDH8-204ENST00000577536 PAK1Q13153 545 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 RASGRF1Q13972 1273 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 MAMDC2Q7Z304 686 aaPredicted RBP4.22□□□□□ -1.73
CDH8-204ENST00000577536 RALYLQ86SE5 291 aaKnown RBP4.22□□□□□ -1.73
CDH8-204ENST00000577536 SCUBE1Q8IWY4 988 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 DNERQ8NFT8 737 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 SH3RF2Q8TEC5 729 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 KISS1RQ969F8 398 aaPredicted RBP4.22□□□□□ -1.73
CDH8-204ENST00000577536 PTPN18Q99952 460 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 CD244Q9BZW8 370 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 MEGF9Q9H1U4 602 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 TSC22D4Q9Y3Q8 395 aa4.22□□□□□ -1.73
CDH8-204ENST00000577536 TCRBV5S4A2TA0A5A2 114 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 E9PSI1 815 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 AQP7O14520 342 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 CNOT4O95628 575 aaKnown RBP4.21□□□□□ -1.74
CDH8-204ENST00000577536 SUMO1P63165 101 aaKnown RBP4.21□□□□□ -1.74
CDH8-204ENST00000577536 ZXDAP98168 799 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 SSRP1Q08945 709 aaKnown RBP4.21□□□□□ -1.74
CDH8-204ENST00000577536 CDSNQ15517 529 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 MTERF2Q49AM1 385 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 NAALADL2Q58DX5 795 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
CDH8-204ENST00000577536 ZBTB38Q8NAP3 1195 aaPredicted RBP4.21□□□□□ -1.74
CDH8-204ENST00000577536 PTPRN2Q92932 1015 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 AJUBAQ96IF1 538 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 CDC6Q99741 560 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 KLC2Q9H0B6 622 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 CCDC113Q9H0I3 377 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 PFDN2Q9UHV9 154 aa4.21□□□□□ -1.74
CDH8-204ENST00000577536 TRBV23-1A0A0A0MS06 115 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 PATE3B3GLJ2 98 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 H0Y858 1186 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 WNT9AO14904 365 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 IL18BPO95998 194 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 C6orf222P0C671 652 aaPredicted RBP4.2□□□□□ -1.74
CDH8-204ENST00000577536 CSF2RBP32927 897 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 DBPQ10586 325 aaPredicted RBP4.2□□□□□ -1.74
CDH8-204ENST00000577536 GPR19Q15760 415 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 FAM209AQ5JX71 171 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 NBPF6Q5VWK0 638 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 FOXB2Q5VYV0 432 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 BTBD8Q5XKL5 378 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 REXO1L1PQ8IX06 675 aa4.2□□□□□ -1.74
CDH8-204ENST00000577536 NLGN4XQ8N0W4 816 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms