RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
TSEN54-204ENST00000577197 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
TSEN54-204ENST00000577197 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 HOXC6P09630 235 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 HSPA8P11142 646 aaKnown RBP13.94□□□□□ -0.18
TSEN54-204ENST00000577197 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
TSEN54-204ENST00000577197 CTGFP29279 349 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
TSEN54-204ENST00000577197 RGS2P41220 211 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 PPP1R2P41236 205 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 UBXN2AP68543 259 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 PDE4DQ08499 809 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 ZNF792Q3KQV3 632 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 MLKLQ8NB16 471 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 RAD54LQ92698 747 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 USP6NLQ92738 828 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 PNMA5Q96PV4 448 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 ARHGAP39Q9C0H5 1083 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 DACH1Q9UI36 760 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 PCDHA5Q9Y5H7 936 aa13.94□□□□□ -0.18
TSEN54-204ENST00000577197 ASTN1O14525 1302 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 PLXNA1Q9UIW2 1896 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 PVALEFA0A1B0GWK0 134 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 WDR64B1ANS9 1081 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 FOXN1O15353 648 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 RGS20O76081 388 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 MYCLP12524 364 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-204ENST00000577197 KCNA2P16389 499 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 NLRP12P59046 1061 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 NEDD9Q14511 834 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 TPRNQ4KMQ1 711 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 COBLL1Q53SF7 1204 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 CCDC47Q96A33 483 aaKnown RBP13.93□□□□□ -0.18
TSEN54-204ENST00000577197 FGD4Q96M96 766 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
TSEN54-204ENST00000577197 BLOC1S4Q9NUP1 217 aa13.93□□□□□ -0.18
TSEN54-204ENST00000577197 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 PGK2P07205 417 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
TSEN54-204ENST00000577197 XRCC5P13010 732 aaKnown RBP13.92□□□□□ -0.18
TSEN54-204ENST00000577197 CDC25AP30304 524 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 ITGB3BPQ13352 177 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-204ENST00000577197 PNOCQ13519 176 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 MORC3Q14149 939 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 GAS2L3Q86XJ1 694 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 CATSPER3Q86XQ3 398 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 NACC1Q96RE7 527 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 MTRQ99707 1265 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 APBA2Q99767 749 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-204ENST00000577197 SRRDQ9UH36 339 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 DNM3Q9UQ16 869 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 MGAMO43451 1857 aa13.92□□□□□ -0.18
TSEN54-204ENST00000577197 RBM47A0AV96 593 aaKnown RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 COBLO75128 1261 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 EYA4O95677 639 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 FLT3LGP49771 235 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 PRKCZQ05513 592 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 MIER3Q7Z3K6 550 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 TRMT44Q8IYL2 757 aaKnown RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 PANK2Q9BZ23 570 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
TSEN54-204ENST00000577197 JPH1Q9HDC5 661 aaPredicted RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 DBR1Q9UK59 544 aaKnown RBP13.91□□□□□ -0.18
TSEN54-204ENST00000577197 EML1O00423 815 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 IKBKBO14920 756 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 MED24O75448 989 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 SLITRK3O94933 977 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 ATG7O95352 703 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
TSEN54-204ENST00000577197 CAP1Q01518 475 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 PSMD2Q13200 908 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 SCFD2Q8WU76 684 aa13.9□□□□□ -0.18
TSEN54-204ENST00000577197 MAML3Q96JK9 1138 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms