RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	XPNPEP3	Q9NQH7	507 aa		11.21	□□□□□ -0.61
SPOP-222	ENST00000577134	SRPRB	Q9Y5M8	271 aa	Known RBP	11.21	□□□□□ -0.61
SPOP-222	ENST00000577134	ELP1	O95163	1332 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	NOP56	O00567	594 aa	Known RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	CTAGE5	O15320	804 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	MSC	O60682	206 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	PPP6R2	O75170	966 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	MYCN	P04198	464 aa	Predicted RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	MMP3	P08254	477 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	C6orf222	P0C671	652 aa	Predicted RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	FSCN1	Q16658	493 aa	Known RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	TPRN	Q4KMQ1	711 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	SPECC1	Q5M775	1068 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	KRI1	Q8N9T8	703 aa	Known RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	PPTC7	Q8NI37	304 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	KCNG4	Q8TDN1	519 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	SEPT1	Q8WYJ6	367 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	FERMT2	Q96AC1	680 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	CSRNP2	Q9H175	543 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	DISC1	Q9NRI5	854 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	LRWD1	Q9UFC0	647 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	TCEAL9	Q9UHQ7	104 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	PCDHA7	Q9UN72	937 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	SAMM50	Q9Y512	469 aa		11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.2	□□□□□ -0.62
SPOP-222	ENST00000577134	WDR81	Q562E7	1941 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134		A6NJR5	290 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	PP2D1	A8MPX8	630 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	ADAMTS4	O75173	837 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	ATG7	O95352	703 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	SUPT20HL2	P0C7V6	817 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	CDC25A	P30304	524 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	SFN	P31947	248 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	TCF7	P36402	384 aa	Predicted RBP	11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	ME1	P48163	572 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	JAK3	P52333	1124 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	NKX3-2	P78367	333 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	PDIA5	Q14554	519 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	EPHA7	Q15375	998 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	GNAS	Q5JWF2	1037 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	UTP14C	Q5TAP6	766 aa	Known RBP	11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	MIS18BP1	Q6P0N0	1132 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	ABHD15	Q6UXT9	468 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	IGSF22	Q8N9C0	903 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	KLHDC9	Q8NEP7	349 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	SPC25	Q9HBM1	224 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	PCDHA10	Q9Y5I2	948 aa		11.19	□□□□□ -0.62
SPOP-222	ENST00000577134	WDR64	B1ANS9	1081 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	CUTA	O60888	179 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	SGPL1	O95470	568 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	PSAP	P07602	524 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	MYL3	P08590	195 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	LONP1	P36776	959 aa	Known RBP	11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	CPT1A	P50416	773 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	LRRC41	Q15345	812 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	KCNA10	Q16322	511 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	DGKD	Q16760	1214 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	BRDT	Q58F21	947 aa	Predicted RBP	11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	SWSAP1	Q6NVH7	229 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	CLEC17A	Q6ZS10	378 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	USP49	Q70CQ1	688 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	BANK1	Q8NDB2	785 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	RDM1	Q8NG50	284 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	DYDC2	Q96IM9	177 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	PCYT2	Q99447	389 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	RAB34	Q9BZG1	259 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	RGL1	Q9NZL6	768 aa		11.18	□□□□□ -0.62
SPOP-222	ENST00000577134	IGKV6D-21	A0A0A0MT36	114 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	BACH1	O14867	736 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	ZEB2	O60315	1214 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	PPFIA4	O75335	1185 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	MED24	O75448	989 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	LGR5	O75473	907 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	TFRC	P02786	760 aa	Known RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	LGALS2	P05162	132 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	GJB1	P08034	283 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	ZNF286B	P0CG31	522 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	HOXD8	P13378	290 aa	Predicted RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CST5	P28325	142 aa	Predicted RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CYP4A11	Q02928	519 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CTTN	Q14247	550 aa	Known RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	UGCG	Q16739	394 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	RNF180	Q86T96	592 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	TRIM50	Q86XT4	487 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	ARRDC4	Q8NCT1	418 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	ERMN	Q8TAM6	284 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	U2AF1L4	Q8WU68	220 aa	Known RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	SYMPK	Q92797	1274 aa	Known RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	EPSTI1	Q96J88	318 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	HSD17B14	Q9BPX1	270 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	C16orf70	Q9BSU1	422 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	MMTAG2	Q9BU76	263 aa	Known RBP	11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	CRISPLD2	Q9H0B8	497 aa		11.17	□□□□□ -0.62
SPOP-222	ENST00000577134	ZNF302	Q9NR11	478 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms