RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 RSPH3Q86UC2 560 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 TRIM50Q86XT4 487 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 LMBR1Q8WVP7 490 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 BCAS3Q9H6U6 928 aa13.45□□□□□ -0.26
CTDNEP1-212ENST00000576613 KAT6AQ92794 2004 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 BMPR1AP36894 532 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 ADAM17P78536 824 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 NUCB1Q02818 461 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 SMAD2Q15796 467 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 XRRA1Q6P2D8 792 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 CYB5R4Q7L1T6 521 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 RTEL1Q9NZ71 1219 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
CTDNEP1-212ENST00000576613 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 GHRP10912 638 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 IRS1P35568 1242 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 LTBRP36941 435 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 MRE11P49959 708 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 SP4Q02446 784 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 NHLH1Q02575 133 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 HYAL1Q12794 435 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 SEMA3FQ13275 785 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 NLRX1Q86UT6 975 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 SMARCC2Q8TAQ2 1214 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 CUL5Q93034 780 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
CTDNEP1-212ENST00000576613 TRIOO75962 3097 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 GRM6O15303 877 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 CYTH3O43739 400 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 CHRNA1P02708 482 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 MMP1P03956 469 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 RPLP2P05387 115 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 SMAD4Q13485 552 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 WTAPQ15007 396 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 CLUL1Q15846 466 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 CATIPQ7Z7H3 387 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 FBXL18Q96ME1 805 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 EHMT1Q9H9B1 1298 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 BAZ2BQ9UIF8 2168 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-212ENST00000576613 MBTPS2O43462 519 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 LINC00271P0C7V0 271 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 TROAPQ12815 778 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 LPIN1Q14693 890 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 HERC4Q5GLZ8 1057 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 CD207Q9UJ71 328 aa13.41□□□□□ -0.26
CTDNEP1-212ENST00000576613 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 ENPP3O14638 875 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 TBX10O75333 385 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 DGKIO75912 1065 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 NDUFV1P49821 464 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 DLX2Q07687 328 aaPredicted RBP13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 MGAT3Q09327 533 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 GRIK4Q16099 956 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 RUFY4Q6ZNE9 571 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 NCOA7Q8NI08 942 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 GLG1Q92896 1179 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 P2RX5Q93086 422 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 ZNF689Q96CS4 500 aaPredicted RBP13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 GPRASP2Q96D09 838 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 MUTYHQ9UIF7 546 aa13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-212ENST00000576613 TTC3P53804 2025 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 MYO7AQ13402 2215 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 MBLAC1A4D2B0 266 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 STXBP3O00186 592 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 CSPG5O95196 566 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 MARK3P27448 753 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 KIF5BP33176 963 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
CTDNEP1-212ENST00000576613 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms