RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 NT5C3AQ9H0P0 336 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 AP5M1Q9H0R1 490 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 TUFT1Q9NNX1 390 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 CCDC39Q9UFE4 941 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 GNEQ9Y223 722 aaKnown RBP12.61□□□□□ -0.39
TRAP1-216ENST00000576335 PCDHA10Q9Y5I2 948 aa12.61□□□□□ -0.39
TRAP1-216ENST00000576335 ZEB2O60315 1214 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 KPNA6O60684 536 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 ATG7O95352 703 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 ARIH2O95376 493 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 SMPD1P17405 629 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 CNGA1P29973 690 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 SLC26A2P50443 739 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 ACTR2P61160 394 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 NKX3-2P78367 333 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 SP2Q02086 613 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
TRAP1-216ENST00000576335 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 NCAPH2Q6IBW4 605 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 OR6J1Q8NGC5 347 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 SEPT1Q8WYJ6 367 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 MRPS27Q92552 414 aaKnown RBP12.6□□□□□ -0.39
TRAP1-216ENST00000576335 ATP6V0A1Q93050 837 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 POLR3CQ9BUI4 534 aaPredicted RBP12.6□□□□□ -0.39
TRAP1-216ENST00000576335 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 UNC45AQ9H3U1 944 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 GDPD2Q9HCC8 539 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
TRAP1-216ENST00000576335 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
TRAP1-216ENST00000576335 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
TRAP1-216ENST00000576335 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 POTEMA6NI47 508 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 MBD3O95983 291 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 P4HBP07237 508 aaKnown RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 RPA1P27694 616 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 MCM4P33991 863 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 GJA9P57773 515 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 IL17AQ16552 155 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 DGKDQ16760 1214 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 CCDC73Q6ZRK6 1079 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 RASSF8Q8NHQ8 419 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 SNX29Q8TEQ0 813 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 ZNF215Q9UL58 517 aaPredicted RBP12.59□□□□□ -0.39
TRAP1-216ENST00000576335 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
TRAP1-216ENST00000576335 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 A6NJR5 290 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 CHMP2AO43633 222 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 CST5P28325 142 aaPredicted RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 PSMC5P62195 406 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 HYIQ5T013 277 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 ABHD15Q6UXT9 468 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 CABP7Q86V35 215 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 SH3TC2Q8TF17 1288 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 SYMPKQ92797 1274 aaKnown RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 CHAMP1Q96JM3 812 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 FAM167AQ96KS9 214 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 CLIC6Q96NY7 704 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 GPR20Q99678 358 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 EIF2AK1Q9BQI3 630 aaKnown RBP12.58□□□□□ -0.4
TRAP1-216ENST00000576335 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.43e-12■■□□□ 12.9
TRAP1-216ENST00000576335 ZSWIM4Q9H7M6 989 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 MCM3APO60318 1980 aa12.58□□□□□ -0.4
TRAP1-216ENST00000576335 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 BACH1O14867 736 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
TRAP1-216ENST00000576335 LGR5O75473 907 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 LYPLA2O95372 231 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 CCNE2O96020 404 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 MMP3P08254 477 aa12.57□□□□□ -0.4
TRAP1-216ENST00000576335 XRCC6P12956 609 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms