RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 NUCB2P80303 420 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TLE2Q04725 743 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 LAMC2Q13753 1193 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MFSD10Q14728 455 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF174Q15697 407 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 FAM47CQ5HY64 1035 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 GALNT17Q6IS24 598 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 GDF6Q6KF10 455 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TRMT1LQ7Z2T5 733 aaKnown RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 NOSTRINQ8IVI9 506 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 FAM126BQ8IXS8 530 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TRAPPC12Q8WVT3 735 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 DPF3Q92784 378 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 SLC5A5Q92911 643 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 VTI1AQ96AJ9 217 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 GLT1D1Q96MS3 346 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MBOAT7Q96N66 472 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MTG1Q9BT17 334 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 KCNMB3Q9NPA1 279 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 PDLIM7Q9NR12 457 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 SLC9A2Q9UBY0 812 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 VAV3Q9UKW4 847 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 Q9Y3F1 56 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 PCDHB6Q9Y5E3 794 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MYH9P35579 1960 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 CYP3A7-CYP3A51PA0A087WV96 503 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 A0A0U1RQG5 324 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 H0YGN5 161 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 NOP56O00567 594 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 CYP2C9P11712 490 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 ATP4AP20648 1035 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 SYT1P21579 422 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 CYP3A7P24462 503 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 MCM4P33991 863 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 CDK7P50613 346 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 SETQ01105 290 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 FAAP100Q0VG06 881 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 RESTQ13127 1097 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 ITGA7Q13683 1181 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 NEDD9Q14511 834 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 DGKDQ16760 1214 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 KIAA0753Q2KHM9 967 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 Q4G0T1 1027 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 LRCH2Q5VUJ6 765 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 LARP1BQ659C4 914 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 NIPA1Q7RTP0 329 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 PCSK9Q8NBP7 692 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 DHX38Q92620 1227 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 SH2D3AQ9BRG2 576 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 BRMS1Q9HCU9 246 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 WRAP73Q9P2S5 460 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 HDAC6Q9UBN7 1215 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 MTMR6Q9Y217 621 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 ZDHHC9Q9Y397 364 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-215ENST00000576033 NFASCO94856 1347 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 ELP1O95163 1332 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 PTPRSQ13332 1948 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 LOXHD1Q8IVV2 1947 aa8.95□□□□□ -0.98
CCDC40-215ENST00000576033 A0A087WWV3 80 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 POTEMA6NI47 508 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 H3BQV1 296 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 ARVCFO00192 962 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 HAS3O00219 553 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 EVI5O60447 810 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 NEMFO60524 1076 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 GAS7O60861 476 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 PSMD10O75832 226 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 BRD1O95696 1058 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 HSP90AA1P07900 732 aaKnown RBP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SUPT20HL2P0C7V6 817 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SMIM10L2AP0DMW4 78 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SMIM10L2BP0DMW5 78 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 TGFB3P10600 412 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 U2AF2P26368 475 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 USP11P51784 963 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SPIRE1Q08AE8 756 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 GNL2Q13823 731 aaKnown RBP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 IL17AQ16552 155 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 FOXD4L6Q3SYB3 417 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 TTC38Q5R3I4 469 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 KCNV1Q6PIU1 500 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 ABHD15Q6UXT9 468 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 FOXD4L3Q6VB84 417 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 RUFY4Q6ZNE9 571 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SLC43A3Q8NBI5 491 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 BANK1Q8NDB2 785 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SENP7Q9BQF6 1050 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 SDF4Q9BRK5 362 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 FOXP1Q9H334 677 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-215ENST00000576033 POLR3EQ9NVU0 708 aa8.94□□□□□ -0.98
CCDC40-215ENST00000576033 PP2D1A8MPX8 630 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 ZNF862O60290 1169 aa8.93□□□□□ -0.98
CCDC40-215ENST00000576033 CD4P01730 458 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms