RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 LMCD1Q9NZU5 365 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 COG5Q9UP83 839 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 SUPT16HQ9Y5B9 1047 aaKnown RBP16.08■□□□□ 0.16
CDC27-217ENST00000575483 EMSYQ7Z589 1322 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.16
CDC27-217ENST00000575483 ERICH2A1L162 156 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 C17orf102A2RUQ5 167 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 RSPH10B2B2RC85 870 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 FIBPO43427 364 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 RSPH10BP0C881 870 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 SMARCA1P28370 1054 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 THPOP40225 353 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 SKIV2LQ15477 1246 aaKnown RBP16.07■□□□□ 0.16
CDC27-217ENST00000575483 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 ATP6V0A1Q93050 837 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 ZBED2Q9BTP6 218 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 MLXIPQ9HAP2 919 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 BOLA1Q9Y3E2 137 aa16.07■□□□□ 0.16
CDC27-217ENST00000575483 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
CDC27-217ENST00000575483 DDAH1O94760 285 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 COL9A1P20849 921 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
CDC27-217ENST00000575483 GNPTABQ3T906 1256 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 PCNX4Q63HM2 1172 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 USP17L6PQ6QN14 398 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 TGS1Q96RS0 853 aaKnown RBP16.06■□□□□ 0.16
CDC27-217ENST00000575483 MTA3Q9BTC8 594 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 RAPGEFL1Q9UHV5 662 aa16.06■□□□□ 0.16
CDC27-217ENST00000575483 CAND2O75155 1236 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 NEDD9Q14511 834 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
CDC27-217ENST00000575483 IL27Q8NEV9 243 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 HLA-CQ95604 372 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 SENP7Q9BQF6 1050 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 C17orf80Q9BSJ5 609 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
CDC27-217ENST00000575483 MTUS1Q9ULD2 1270 aa16.05■□□□□ 0.16
CDC27-217ENST00000575483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.04■□□□□ 0.16
CDC27-217ENST00000575483 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
CDC27-217ENST00000575483 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
CDC27-217ENST00000575483 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 XRRA1Q6P2D8 792 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 LMBR1Q8WVP7 490 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 TTC3P53804 2025 aa16.04■□□□□ 0.16
CDC27-217ENST00000575483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
CDC27-217ENST00000575483 PRC1O43663 620 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 ATP9AO75110 1047 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 PPP1R37O75864 691 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 CTSHP09668 335 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 KCNA2P16389 499 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 ITGB5P18084 799 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
CDC27-217ENST00000575483 TOP1MTQ969P6 601 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 RRP36Q96EU6 259 aaKnown RBP16.03■□□□□ 0.16
CDC27-217ENST00000575483 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
CDC27-217ENST00000575483 AMHP03971 560 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 LINC00271P0C7V0 271 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 KIF5BP33176 963 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 RPAINQ86UA6 219 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
CDC27-217ENST00000575483 KHSRPQ92945 711 aaKnown RBP eCLIP16.02■□□□□ 0.165e-8■□□□□ 11.1
CDC27-217ENST00000575483 LZTS2Q9BRK4 669 aa16.02■□□□□ 0.16
CDC27-217ENST00000575483 TMEM121BQ9BXQ6 578 aaPredicted RBP16.02■□□□□ 0.16
CDC27-217ENST00000575483 GSTTP1A0A1W2PQM5 241 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 SLC27A2O14975 620 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 CHRNA1P02708 482 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 RXRAP19793 462 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 LIFRP42702 1097 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
CDC27-217ENST00000575483 MGAT3Q09327 533 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 RUFY4Q6ZNE9 571 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 SEPT8Q92599 483 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 GPRASP2Q96D09 838 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 TMEM87BQ96K49 555 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 EHMT1Q9H9B1 1298 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
CDC27-217ENST00000575483 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 ZNF215Q9UL58 517 aaPredicted RBP16.01■□□□□ 0.15
CDC27-217ENST00000575483 UBIAD1Q9Y5Z9 338 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 KIAA1671Q9BY89 1806 aa16.01■□□□□ 0.15
CDC27-217ENST00000575483 NRCAMQ92823 1304 aa16■□□□□ 0.15
CDC27-217ENST00000575483 MBLAC1A4D2B0 266 aaPredicted RBP16■□□□□ 0.15
CDC27-217ENST00000575483 MCM5P33992 734 aa16■□□□□ 0.15
CDC27-217ENST00000575483 TCF7P36402 384 aaPredicted RBP16■□□□□ 0.15
CDC27-217ENST00000575483 ARHGAP4P98171 946 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms