RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 MSH4O15457 936 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 EDIL3O43854 480 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 BAG4O95429 457 aaKnown RBP17.21■□□□□ 0.35
LITAF-217ENST00000575426 ACTR2P61160 394 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 KRT76Q01546 638 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
LITAF-217ENST00000575426 PRPF38BQ5VTL8 546 aaKnown RBP17.21■□□□□ 0.35
LITAF-217ENST00000575426 LRCH2Q5VUJ6 765 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
LITAF-217ENST00000575426 MCTP1Q6DN14 999 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 FAM126BQ8IXS8 530 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 GLG1Q92896 1179 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 RIT2Q99578 217 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 LBHD1Q9BQE6 289 aaPredicted RBP17.21■□□□□ 0.35
LITAF-217ENST00000575426 TEKT3Q9BXF9 490 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
LITAF-217ENST00000575426 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 HAS3O00219 553 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 GAS7O60861 476 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 RAG1P15918 1043 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
LITAF-217ENST00000575426 MIS18BP1Q6P0N0 1132 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
LITAF-217ENST00000575426 LENG9Q96B70 501 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
LITAF-217ENST00000575426 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 PDLIM7Q9NR12 457 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
LITAF-217ENST00000575426 SAMM50Q9Y512 469 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 CEP290O15078 2479 aa17.2■□□□□ 0.34
LITAF-217ENST00000575426 BACH1O14867 736 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 DHX15O43143 795 aaKnown RBP17.19■□□□□ 0.34
LITAF-217ENST00000575426 B4GALT4O60513 344 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 CD4P01730 458 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
LITAF-217ENST00000575426 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 PDCP20941 246 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 SESTD1Q86VW0 696 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 NOSTRINQ8IVI9 506 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
LITAF-217ENST00000575426 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 FAM20AQ96MK3 541 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 TRPV6Q9H1D0 765 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 ERAP1Q9NZ08 941 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 EMSYQ7Z589 1322 aa17.19■□□□□ 0.34
LITAF-217ENST00000575426 TBX3O15119 743 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 SLC37A4O43826 429 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 ATG7O95352 703 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 PSAPP07602 524 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 GNAT1P11488 350 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 STAT5BP51692 787 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 PTGISQ16647 500 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 TRMT13Q9NUP7 481 aaKnown RBP17.18■□□□□ 0.34
LITAF-217ENST00000575426 GTF2IRD1Q9UHL9 959 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 PCDHA10Q9Y5I2 948 aa17.18■□□□□ 0.34
LITAF-217ENST00000575426 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 WDR64B1ANS9 1081 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 LGR5O75473 907 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 CCNE2O96020 404 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.34
LITAF-217ENST00000575426 MARK3P27448 753 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 SFNP31947 248 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 ABHD15Q6UXT9 468 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 SLFN12Q8IYM2 578 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 ETNPPLQ8TBG4 499 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
LITAF-217ENST00000575426 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
LITAF-217ENST00000575426 CHMP2AO43633 222 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 PSMD10O75832 226 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 TIMP1P01033 207 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 SMIM10L2AP0DMW4 78 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 SMIM10L2BP0DMW5 78 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 SLC26A2P50443 739 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 JAK3P52333 1124 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 CALCRLQ16602 461 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 GDF6Q6KF10 455 aaPredicted RBP17.16■□□□□ 0.34
LITAF-217ENST00000575426 SWSAP1Q6NVH7 229 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 MIER3Q7Z3K6 550 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 CCDC155Q8N6L0 562 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 HIPK3Q9H422 1215 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 DISC1Q9NRI5 854 aa17.16■□□□□ 0.34
LITAF-217ENST00000575426 KIF28PB7ZC32 967 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms