RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-214ENST00000574003 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 SERINC5Q86VE9 423 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 RASGRP4Q8TDF6 673 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 PCYT2Q99447 389 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
RPAIN-214ENST00000574003 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 PRRC2BQ5JSZ5 2229 aaKnown RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 EPOPA6NHQ4 379 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 DDX39AO00148 427 aaKnown RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 DLL1O00548 723 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 CXCL10P02778 98 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 SCG2P13521 617 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 ITGB3BPQ13352 177 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 NTRK3Q16288 839 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 HERC6Q8IVU3 1022 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-214ENST00000574003 SLC26A6Q9BXS9 759 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 AGXT2Q9BYV1 514 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
RPAIN-214ENST00000574003 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
RPAIN-214ENST00000574003 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 IGFBP4P22692 258 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 PSMA5P28066 241 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 RCAN1P53805 252 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 IGBP1P78318 339 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 KRT40Q6A162 431 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 CNKSR3Q6P9H4 555 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 SLC9A7Q96T83 725 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 AGO4Q9HCK5 861 aaKnown RBP12.94□□□□□ -0.34
RPAIN-214ENST00000574003 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 NID2Q14112 1375 aa12.94□□□□□ -0.34
RPAIN-214ENST00000574003 FAM86B1E9PN63 330 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 FAM86B2P0C5J1 330 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 SREBF1P36956 1147 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 KCNJ6P48051 423 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 ADAM17P78536 824 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 STK3Q13188 491 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 CEP55Q53EZ4 464 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 MICALL1Q8N3F8 863 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-214ENST00000574003 TRAPPC12Q8WVT3 735 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 GLG1Q92896 1179 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 GAS2L1Q99501 681 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-214ENST00000574003 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 JPH1Q9HDC5 661 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-214ENST00000574003 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
RPAIN-214ENST00000574003 ZNF215Q9UL58 517 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-214ENST00000574003 CCDC196A0A1B0GTZ2 297 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 MEIS1O00470 390 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 EDIL3O43854 480 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 LGR5O75473 907 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 CCNE2O96020 404 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-214ENST00000574003 ZNF76P36508 570 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 ACTR2P61160 394 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 TAP1Q03518 808 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 GRIK4Q16099 956 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 MICAL3Q7RTP6 2002 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 AIFM3Q96NN9 605 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 ZMYND12Q9H0C1 365 aa12.92□□□□□ -0.34
RPAIN-214ENST00000574003 IGLV3-22A0A075B6J6 115 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 hCG_1984214I3L0E3 225 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 TLL1O43897 1013 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 CHRNA1P02708 482 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 INSRRP14616 1297 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 EVCP57679 992 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
RPAIN-214ENST00000574003 MARCH8Q5T0T0 291 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 ZNF713Q8N859 430 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-214ENST00000574003 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 SDF4Q9BRK5 362 aa12.91□□□□□ -0.34
RPAIN-214ENST00000574003 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms