RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 SCN5AQ14524 2016 aa16.36■□□□□ 0.21
ABR-223ENST00000573895 ATP9AO75110 1047 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 LGALS2P05162 132 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 CYP3A4P08684 503 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 HOXC8P31273 242 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 CCL23P55773 120 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 NIPA1Q7RTP0 329 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
ABR-223ENST00000573895 RETREG2Q8NC44 543 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 CRYGNQ8WXF5 182 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 CTAGE1Q96RT6 745 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
ABR-223ENST00000573895 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
ABR-223ENST00000573895 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
ABR-223ENST00000573895 MEIS1O00470 390 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 SORBS3O60504 671 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 PARNO95453 639 aaKnown RBP16.34■□□□□ 0.21
ABR-223ENST00000573895 FGBP02675 491 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 XBP1P17861 261 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 CHMP4BP1P59074 171 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 PTK7Q13308 1070 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
ABR-223ENST00000573895 ZNF215Q9UL58 517 aaPredicted RBP16.34■□□□□ 0.21
ABR-223ENST00000573895 NFASCO94856 1347 aa16.34■□□□□ 0.21
ABR-223ENST00000573895 TET1Q8NFU7 2136 aa16.33■□□□□ 0.21
ABR-223ENST00000573895 IQCF3P0C7M6 154 aa16.33■□□□□ 0.2
ABR-223ENST00000573895 SYT1P21579 422 aa16.33■□□□□ 0.2
ABR-223ENST00000573895 ARHGAP4P98171 946 aa16.33■□□□□ 0.2
ABR-223ENST00000573895 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
ABR-223ENST00000573895 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
ABR-223ENST00000573895 TMEM265A0A087WTH1 108 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 STX6O43752 255 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 ACRP10323 421 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 GNAT1P11488 350 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 COL6A3P12111 3177 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 TRIM29Q14134 588 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 DEFB123Q8N688 67 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 CYP2W1Q8TAV3 490 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 VWCEQ96DN2 955 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 SCLYQ96I15 445 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
ABR-223ENST00000573895 CHD9Q3L8U1 2897 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 GSTTP1A0A1W2PQM5 241 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 H3BQV1 296 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 SELPP16109 830 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 CIITAP33076 1130 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
ABR-223ENST00000573895 ZNF76P36508 570 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
ABR-223ENST00000573895 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 RNPEPQ9H4A4 650 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
ABR-223ENST00000573895 JPH1Q9HDC5 661 aaPredicted RBP16.31■□□□□ 0.2
ABR-223ENST00000573895 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
ABR-223ENST00000573895 EMSYQ7Z589 1322 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 NRCAMQ92823 1304 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 FAM86B1E9PN63 330 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 CAND2O75155 1236 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 FAM86B2P0C5J1 330 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 SMIM10L2AP0DMW4 78 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 SMIM10L2BP0DMW5 78 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 ARP10275 920 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 CKBP12277 381 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 ACTN1P12814 892 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
ABR-223ENST00000573895 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
ABR-223ENST00000573895 SMARCAD1Q9H4L7 1026 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 MTMR10Q9NXD2 777 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 ERAP1Q9NZ08 941 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
ABR-223ENST00000573895 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
ABR-223ENST00000573895 WDR81Q562E7 1941 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 LGR5O75473 907 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 USP11P51784 963 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 NLRP5P59047 1200 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 ADAM17P78536 824 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 SP4Q02446 784 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
ABR-223ENST00000573895 HIC1Q14526 733 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
ABR-223ENST00000573895 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 PLA2G4DQ86XP0 818 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 DAGLBQ8NCG7 672 aa16.29■□□□□ 0.2
ABR-223ENST00000573895 TNPO1Q92973 898 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms