RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MAFAQ8NHW3 353 aaPredicted RBP19.95■□□□□ 0.78
SMG6-214ENST00000573827 PHOSPHO2Q8TCD6 241 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 PCYT2Q99447 389 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 MXRA8Q9BRK3 442 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 OSBPL7Q9BZF2 842 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 KCNH7Q9NS40 1196 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
SMG6-214ENST00000573827 CCDC196A0A1B0GTZ2 297 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 MEIS1O00470 390 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
SMG6-214ENST00000573827 PARNO95453 639 aaKnown RBP19.94■□□□□ 0.78
SMG6-214ENST00000573827 NEFLP07196 543 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 ARP10275 920 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 ACTN1P12814 892 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 PSMA5P28066 241 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 TCF7P36402 384 aaPredicted RBP19.94■□□□□ 0.78
SMG6-214ENST00000573827 SP4Q02446 784 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 ITGB3BPQ13352 177 aaPredicted RBP19.94■□□□□ 0.78
SMG6-214ENST00000573827 AP3B2Q13367 1082 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 UTP14CQ5TAP6 766 aaKnown RBP19.94■□□□□ 0.78
SMG6-214ENST00000573827 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 RUFY3Q7L099 469 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 USP38Q8NB14 1042 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 LMBR1Q8WVP7 490 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 ATP6V0A1Q93050 837 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 SLC9A7Q96T83 725 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 TM6SF1Q9BZW5 370 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 FTOQ9C0B1 505 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMG6-214ENST00000573827 ZMYND12Q9H0C1 365 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 PRDM12Q9H4Q4 367 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 SETD4Q9NVD3 440 aa19.94■□□□□ 0.78
SMG6-214ENST00000573827 BDP1A6H8Y1 2624 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 LGR5O75473 907 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 WDR5P61964 334 aaKnown RBP19.93■□□□□ 0.78
SMG6-214ENST00000573827 FGD1P98174 961 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 CEP55Q53EZ4 464 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 CNKSR3Q6P9H4 555 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 HERC6Q8IVU3 1022 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 SEPT1Q8WYJ6 367 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 PHKBQ93100 1093 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 GLT8D2Q9H1C3 349 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 PKD2L1Q9P0L9 805 aa19.93■□□□□ 0.78
SMG6-214ENST00000573827 PRRC2BQ5JSZ5 2229 aaKnown RBP19.92■□□□□ 0.78
SMG6-214ENST00000573827 EDIL3O43854 480 aa19.92■□□□□ 0.78
SMG6-214ENST00000573827 IFNAR1P17181 557 aa19.92■□□□□ 0.78
SMG6-214ENST00000573827 NCOA5Q9HCD5 579 aaKnown RBP19.92■□□□□ 0.78
SMG6-214ENST00000573827 AGO4Q9HCK5 861 aaKnown RBP19.92■□□□□ 0.78
SMG6-214ENST00000573827 ZNF215Q9UL58 517 aaPredicted RBP19.92■□□□□ 0.78
SMG6-214ENST00000573827 NAP1L2Q9ULW6 460 aaPredicted RBP19.92■□□□□ 0.78
SMG6-214ENST00000573827 NFASCO94856 1347 aa19.92■□□□□ 0.78
SMG6-214ENST00000573827 IGLV3-22A0A075B6J6 115 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 FAM86B1E9PN63 330 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 PPFIA3O75145 1194 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 CA3P07451 260 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 CYP3A4P08684 503 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 FAM86B2P0C5J1 330 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 THPOP40225 353 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 DEFB103AP81534 67 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 ARHGAP4P98171 946 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 TMCO2Q7Z6W1 182 aaPredicted RBP19.91■□□□□ 0.78
SMG6-214ENST00000573827 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMG6-214ENST00000573827 RNF26Q9BY78 433 aaPredicted RBP19.91■□□□□ 0.78
SMG6-214ENST00000573827 EHMT1Q9H9B1 1298 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 SLC28A3Q9HAS3 691 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 JPH1Q9HDC5 661 aaPredicted RBP19.91■□□□□ 0.78
SMG6-214ENST00000573827 EMSYQ7Z589 1322 aa19.91■□□□□ 0.78
SMG6-214ENST00000573827 MBLAC1A4D2B0 266 aaPredicted RBP19.9■□□□□ 0.78
SMG6-214ENST00000573827 RSPH10B2B2RC85 870 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 DHX15O43143 795 aaKnown RBP19.9■□□□□ 0.78
SMG6-214ENST00000573827 CAND2O75155 1236 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 RSPH10BP0C881 870 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 FAM26DQ5JW98 314 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 MARCH8Q5T0T0 291 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 JAKMIP3Q5VZ66 844 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 NIPA1Q7RTP0 329 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 RPAINQ86UA6 219 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 UPF3BQ9BZI7 483 aaKnown RBP19.9■□□□□ 0.78
SMG6-214ENST00000573827 NRCAMQ92823 1304 aa19.9■□□□□ 0.78
SMG6-214ENST00000573827 ABHD14A-ACY1A0A1B0GW23 586 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 ATG7O95352 703 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 CCNE2O96020 404 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 CCT2P78371 535 aaKnown RBP19.89■□□□□ 0.77
SMG6-214ENST00000573827 PLEKHG4Q58EX7 1191 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 PPP2R2DQ66LE6 453 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 SPRED2Q7Z698 418 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 BRWD1Q9NSI6 2320 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 ERAP1Q9NZ08 941 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
SMG6-214ENST00000573827 KAT6AQ92794 2004 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 IGKV6D-21A0A0A0MT36 114 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 LCHNA4D1U4 455 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 EPOPA6NHQ4 379 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 GNAT1P11488 350 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 ACTR2P61160 394 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 TAP1Q03518 808 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 DBF4BQ8NFT6 615 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 IL17RAQ96F46 866 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 SMARCAD1Q9H4L7 1026 aa19.88■□□□□ 0.77
SMG6-214ENST00000573827 CYP46A1Q9Y6A2 500 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms