RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 WASF3Q9UPY6 502 aa6.88□□□□□ -1.31
CDC27-215ENST00000573550 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
CDC27-215ENST00000573550 CLSPNQ9HAW4 1339 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 CCDC66A2RUB6 948 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 SH3D21A4FU49 640 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
CDC27-215ENST00000573550 TRIM13O60858 407 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 GRIN1Q05586 938 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 FNDC3BQ53EP0 1204 aaKnown RBP6.87□□□□□ -1.31
CDC27-215ENST00000573550 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
CDC27-215ENST00000573550 ZBTB8AQ96BR9 441 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 SRPK3Q9UPE1 567 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 NUB1Q9Y5A7 615 aa6.87□□□□□ -1.31
CDC27-215ENST00000573550 CUX1P39880 1505 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 MAP3K1Q13233 1512 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 ASMTLO95671 621 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 KCNA6P17658 529 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 THBS2P35442 1172 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 ADAM9Q13443 819 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 SMAD4Q13485 552 aaKnown RBP6.86□□□□□ -1.31
CDC27-215ENST00000573550 FAM47CQ5HY64 1035 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 ABHD17CQ6PCB6 329 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 ARHGAP36Q6ZRI8 547 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 STK32CQ86UX6 486 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 OSTM1Q86WC4 334 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 PROSER1Q86XN7 944 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 KYQ8NBH2 561 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 CELF4Q9BZC1 486 aaKnown RBP6.86□□□□□ -1.31
CDC27-215ENST00000573550 SMURF1Q9HCE7 757 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 CATSPERZQ9NTU4 200 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 COQ6Q9Y2Z9 468 aa6.86□□□□□ -1.31
CDC27-215ENST00000573550 MRPL42Q9Y6G3 142 aaKnown RBP6.86□□□□□ -1.31
CDC27-215ENST00000573550 CUX2O14529 1486 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 ACOT7O00154 380 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 GSTA4O15217 222 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 FAHP16930 419 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 DNM2P50570 870 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 JAM2P57087 298 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 ST5P78524 1137 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 LACTBP83111 547 aaPredicted RBP6.85□□□□□ -1.31
CDC27-215ENST00000573550 PAN2Q504Q3 1202 aaKnown RBP6.85□□□□□ -1.31
CDC27-215ENST00000573550 LIPIQ6XZB0 460 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 PTRH1Q86Y79 214 aaKnown RBP6.85□□□□□ -1.31
CDC27-215ENST00000573550 MARCH10Q8NA82 808 aaPredicted RBP6.85□□□□□ -1.31
CDC27-215ENST00000573550 KCNC2Q96PR1 638 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 ADAMTS20P59510 1910 aa6.85□□□□□ -1.31
CDC27-215ENST00000573550 KIF27Q86VH2 1401 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 DNAJC8O75937 253 aaPredicted RBP6.84□□□□□ -1.31
CDC27-215ENST00000573550 RTP5Q14D33 572 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 CRY1Q16526 586 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 FIGNQ5HY92 759 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 PRR31Q5SQ13 230 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 OVCH1Q7RTY7 1134 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 HOMER1Q86YM7 354 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 SYNPOQ8N3V7 929 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 CISD2Q8N5K1 135 aaKnown RBP6.84□□□□□ -1.31
CDC27-215ENST00000573550 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 ARAP1Q96P48 1450 aa6.84□□□□□ -1.31
CDC27-215ENST00000573550 FAM90A27PA6NNH2 459 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 RFPL3O75679 317 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 KRT15P19012 456 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 FBLN7Q53RD9 439 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 HHIPL2Q6UWX4 724 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
CDC27-215ENST00000573550 NLGN4XQ8N0W4 816 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 CARFQ8N187 725 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 TTLL6Q8N841 843 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 ZSWIM3Q96MP5 696 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 LUC7LQ9NQ29 371 aaKnown RBP6.83□□□□□ -1.32
CDC27-215ENST00000573550 NTMQ9P121 344 aa6.83□□□□□ -1.32
CDC27-215ENST00000573550 KCNK3O14649 394 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
CDC27-215ENST00000573550 PTPN1P18031 435 aaKnown RBP6.82□□□□□ -1.32
CDC27-215ENST00000573550 BMP7P18075 431 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 SDSP20132 328 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 SLURP1P55000 103 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 PABPC4Q13310 644 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC27-215ENST00000573550 TCEA2Q15560 299 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 TKFCQ3LXA3 575 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 CD276Q5ZPR3 534 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 TMC5Q6UXY8 1006 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 C16orf86Q6ZW13 317 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 NOSTRINQ8IVI9 506 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 APPBP2Q92624 585 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 TMEM209Q96SK2 561 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 TNPO3Q9Y5L0 923 aaKnown RBP6.82□□□□□ -1.32
CDC27-215ENST00000573550 ATP23Q9Y6H3 246 aa6.82□□□□□ -1.32
CDC27-215ENST00000573550 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
CDC27-215ENST00000573550 BTBD11A6QL63 1104 aa6.81□□□□□ -1.32
CDC27-215ENST00000573550 NPTXRO95502 500 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms