RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CTSHP09668 335 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 GPNMBQ14956 572 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 CNKSR3Q6P9H4 555 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 TEX2Q8IWB9 1127 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 FBXL16Q8N461 479 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 CCDC12Q8WUD4 166 aaPredicted RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 SDF4Q9BRK5 362 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 LARP6Q9BRS8 491 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 AGXT2Q9BYV1 514 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 UPF3BQ9BZI7 483 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 NCOA5Q9HCD5 579 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 ZSWIM6Q9HCJ5 1215 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 JPH1Q9HDC5 661 aaPredicted RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 GSTTP1A0A1W2PQM5 241 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 RSPH10B2B2RC85 870 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 CA3P07451 260 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 RSPH10BP0C881 870 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 ARP10275 920 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 SREBF1P36956 1147 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 TOB2Q14106 344 aaPredicted RBP14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 CEP55Q53EZ4 464 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 PHOSPHO2Q8TCD6 241 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 LMBR1Q8WVP7 490 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 SLC9A2Q9UBY0 812 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 COL6A3P12111 3177 aa14.49□□□□□ -0.09
NPLOC4-213ENST00000573519 EMSYQ7Z589 1322 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 DDX39AO00148 427 aaKnown RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 CXCL10P02778 98 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 IGFBP4P22692 258 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 GNA11P29992 359 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 HOXC8P31273 242 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 WDR5P61964 334 aaKnown RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 PPFIA1Q13136 1202 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 STK3Q13188 491 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 IKBKEQ14164 716 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 PKN1Q16512 942 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 TRAF7Q6Q0C0 670 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 TMCO2Q7Z6W1 182 aaPredicted RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 HERC6Q8IVU3 1022 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 REXO1Q8N1G1 1221 aaKnown RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 PPM1EQ8WY54 764 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 ZBED2Q9BTP6 218 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 ZMYND12Q9H0C1 365 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 AZI2Q9H6S1 392 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 AGO4Q9HCK5 861 aaKnown RBP14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 PDRG1Q9NUG6 133 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 GBF1Q92538 1859 aa14.48□□□□□ -0.09
NPLOC4-213ENST00000573519 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 ESYT2A0FGR8 921 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 CPLX1O14810 134 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 TLL1O43897 1013 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 LGR5O75473 907 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 IFNAR1P17181 557 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 IGBP1P78318 339 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 DEFB103AP81534 67 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 MBTPS1Q14703 1052 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 NTRK3Q16288 839 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 TCTN1Q2MV58 587 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 PLA2G4DQ86XP0 818 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 TRIM22Q8IYM9 498 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 CCDC148Q8NFR7 591 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 UIMC1Q96RL1 719 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 TM6SF1Q9BZW5 370 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 VPS54Q9P1Q0 977 aa14.47□□□□□ -0.09
NPLOC4-213ENST00000573519 NFASCO94856 1347 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 ABHD14A-ACY1A0A1B0GW23 586 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 FAM86B1E9PN63 330 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 MEIS1O00470 390 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 ADAMTS3O15072 1205 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 FAM86B2P0C5J1 330 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 EVCP57679 992 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 NLRP5P59047 1200 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 ACTR2P61160 394 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 SSRP1Q08945 709 aaKnown RBP14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 ITGB3BPQ13352 177 aaPredicted RBP14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 GRIK4Q16099 956 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 BICD2Q8TD16 824 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 RASGRP4Q8TDF6 673 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 TRPC6Q9Y210 931 aa14.46□□□□□ -0.09
NPLOC4-213ENST00000573519 CDH23Q9H251 3354 aa14.46□□□□□ -0.1
NPLOC4-213ENST00000573519 TRIP12Q14669 1992 aaPredicted RBP14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 DLL1O00548 723 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 EFCAB14O75071 495 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 CAND2O75155 1236 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 SEC24BO95487 1268 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 CPLX2Q6PUV4 134 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 RUFY4Q6ZNE9 571 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 NIPA1Q7RTP0 329 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 DBF4BQ8NFT6 615 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 ZNF274Q96GC6 653 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms