RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
TVP23A-207ENST00000573360 CLSTN1O94985 981 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 ETNPPLQ8TBG4 499 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 MED15Q96RN5 788 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 UNC45AQ9H3U1 944 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 ACAD9Q9H845 621 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 ZNF214Q9UL59 606 aaPredicted RBP15.46■□□□□ 0.07
TVP23A-207ENST00000573360 TELO2Q9Y4R8 837 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 CEP350Q5VT06 3117 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 MRPS9P82933 396 aaKnown RBP15.46■□□□□ 0.07
TVP23A-207ENST00000573360 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
TVP23A-207ENST00000573360 MAGEC2Q9UBF1 373 aaPredicted RBP15.46■□□□□ 0.07
TVP23A-207ENST00000573360 RABGAP1Q9Y3P9 1069 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 PPP2R3BQ9Y5P8 575 aa15.46■□□□□ 0.07
TVP23A-207ENST00000573360 TEX33O43247 280 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 ZSCAN12O43309 604 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 SARSP49591 514 aaKnown RBP15.46■□□□□ 0.06
TVP23A-207ENST00000573360 HUNKP57058 714 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 SYCP1Q15431 976 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 TMCO3Q6UWJ1 677 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 NLRX1Q86UT6 975 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 PDCD2LQ9BRP1 358 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.06
TVP23A-207ENST00000573360 PPP1R3GB7ZBB8 358 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 USO1O60763 962 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 TBCAO75347 108 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 CASQ1P31415 396 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 MTIF2P46199 727 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 HERVK_113P62684 666 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 RBM46Q8TBY0 533 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 BAG1Q99933 345 aaPredicted RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 MXRA8Q9BRK3 442 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 FGFBP2Q9BYJ0 223 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 IKZF4Q9H2S9 585 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 KBTBD4Q9NVX7 518 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 Q3C1V9 767 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 TKFCQ3LXA3 575 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 NAP1L4Q99733 375 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 LXNQ9BS40 222 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 EFCC1Q9HA90 598 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 IKBKBO14920 756 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 PDIA5Q14554 519 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
TVP23A-207ENST00000573360 MYCT1Q8N699 235 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 ANKRD20A12PQ8NF67 263 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 NT5C3AQ9H0P0 336 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 LZTFL1Q9NQ48 299 aa15.45■□□□□ 0.06
TVP23A-207ENST00000573360 CCL15-CCL14A0A0B4J2E2 113 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 MMP14P50281 582 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 PGM5Q15124 567 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 CCL15Q16663 113 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 PLA2G4FQ68DD2 849 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 NPEPPSP55786 919 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 PPFIBP1Q86W92 1011 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 FAM20AQ96MK3 541 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.06
TVP23A-207ENST00000573360 IGLV3-22A0A075B6J6 115 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 ARHGEF35A5YM69 484 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 PRPF6O94906 941 aaKnown RBP15.44■□□□□ 0.06
TVP23A-207ENST00000573360 GCNT3O95395 438 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 C2orf69Q8N8R5 385 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 RDH13Q8NBN7 331 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 ZNF668Q96K58 619 aaPredicted RBP15.44■□□□□ 0.06
TVP23A-207ENST00000573360 MRPL44Q9H9J2 332 aaKnown RBP15.44■□□□□ 0.06
TVP23A-207ENST00000573360 GBA2Q9HCG7 927 aaPredicted RBP15.44■□□□□ 0.06
TVP23A-207ENST00000573360 PXMP2Q9NR77 195 aa15.44■□□□□ 0.06
TVP23A-207ENST00000573360 SSC5DA1L4H1 1573 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 FAM13AO94988 1023 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 SOX10P56693 466 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 BMS1Q14692 1282 aaKnown RBP15.43■□□□□ 0.06
TVP23A-207ENST00000573360 FILIP1LQ4L180 1135 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 FAM26FQ5R3K3 315 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 OTOP1Q7RTM1 612 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 NSUN6Q8TEA1 469 aaKnown RBP15.43■□□□□ 0.06
TVP23A-207ENST00000573360 RUSC1Q9BVN2 902 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 SPATC1LQ9H0A9 340 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
TVP23A-207ENST00000573360 MARK3P27448 753 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 SPATA1Q5VX52 437 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 TRIML1Q8N9V2 468 aa15.43■□□□□ 0.06
TVP23A-207ENST00000573360 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
TVP23A-207ENST00000573360 COASYQ13057 564 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 ITGB3BPQ13352 177 aaPredicted RBP15.42■□□□□ 0.06
TVP23A-207ENST00000573360 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 VSTM4Q8IW00 320 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 PPP1R13LQ8WUF5 828 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 FOCADQ5VW36 1801 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 PIK3CDO00329 1044 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 CLIC2O15247 247 aa15.42■□□□□ 0.06
TVP23A-207ENST00000573360 GJA5P36382 358 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms