RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TAF4BQ92750 862 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 APOL6Q9BWW8 343 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 K7ERI5 159 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 MAFGO15525 162 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 RGS2P41220 211 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 DGKZQ13574 1117 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 SLC17A8Q8NDX2 589 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 EFCC1Q9HA90 598 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 TBX3O15119 743 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 COBLO75128 1261 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 DLATP10515 647 aaKnown RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 GNAT1P11488 350 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 CASP1P29466 404 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 DNA2P51530 1060 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 NOGQ13253 232 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 MORC3Q14149 939 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 PDIA5Q14554 519 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 DAGLBQ8NCG7 672 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 SYTL5Q8TDW5 730 aaPredicted RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 FOXP2O15409 715 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 CYLC1P35663 651 aaPredicted RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
SMG6-213ENST00000573166 CATSPERGQ6ZRH7 1159 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
SMG6-213ENST00000573166 NRAPQ86VF7 1730 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 SPDYE5A6NIY4 337 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 GH1P01241 217 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 FGRP09769 529 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 KRT5P13647 590 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 YARSP54577 528 aaKnown RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 SPOUT1Q5T280 376 aaKnown RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 IGSF22Q8N9C0 903 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 CCDC42Q96M95 316 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 ATP6V0A4Q9HBG4 840 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.639e-7■■■■■ 105.8
SMG6-213ENST00000573166 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 TNNT1P13805 278 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 NR2F2P24468 414 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 CETN2P41208 172 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 DPCR1Q3MIW9 517 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 ACCSQ96QU6 501 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 FBXO2Q9UK22 296 aaPredicted RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 KIF5CO60282 957 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 GNA14O95837 355 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 ERVK-24P63145 666 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 PSPC1Q8WXF1 523 aaKnown RBP11.13□□□□□ -0.63
SMG6-213ENST00000573166 WNK4Q96J92 1243 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 RIT2Q99578 217 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
SMG6-213ENST00000573166 CLIC2O15247 247 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 TCP11Q8WWU5 503 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 RAD54LQ92698 747 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 MAN1B1Q9UKM7 699 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
SMG6-213ENST00000573166 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 STRNO43815 780 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 SKILP12757 684 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 OAZ1P54368 228 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 GPS2Q13227 327 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 CUL4BQ13620 913 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 ZNF668Q96K58 619 aaPredicted RBP11.12□□□□□ -0.63
SMG6-213ENST00000573166 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 MOV10L1Q9BXT6 1211 aaKnown RBP11.12□□□□□ -0.63
SMG6-213ENST00000573166 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 ANKRD62A6NC57 917 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 RDXP35241 583 aaKnown RBP11.12□□□□□ -0.63
SMG6-213ENST00000573166 ZNF658Q5TYW1 1059 aaPredicted RBP11.12□□□□□ -0.63
SMG6-213ENST00000573166 CATSPER4Q7RTX7 472 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 GOLPH3LQ9H4A5 285 aa11.12□□□□□ -0.63
SMG6-213ENST00000573166 KCNJ18B7U540 433 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PRPF6O94906 941 aaKnown RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 RARBP10826 455 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 SREBF1P36956 1147 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 KCNJ12Q14500 433 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PTPN14Q15678 1187 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PPP1R9BQ96SB3 815 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 PCIF1Q9H4Z3 704 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
SMG6-213ENST00000573166 TMEM191BP0C7N4 346 aa11.11□□□□□ -0.63
SMG6-213ENST00000573166 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms