RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 FBXO18Q8NFZ0 1043 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 ZNF577Q9BSK1 485 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 PRDM5Q9NQX1 630 aaPredicted RBP17.94■□□□□ 0.46
CHD3-215ENST00000572750 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 NFASCO94856 1347 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 K7ELQ4 463 aaPredicted RBP17.93■□□□□ 0.46
CHD3-215ENST00000572750 IPO5O00410 1097 aaKnown RBP17.93■□□□□ 0.46
CHD3-215ENST00000572750 CDK7P50613 346 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 CUL4AQ13619 759 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 SAFBQ15424 915 aaKnown RBP eCLIP17.93■□□□□ 0.46
CHD3-215ENST00000572750 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 FAM47CQ5HY64 1035 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 NEK8Q86SG6 692 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 SLC43A3Q8NBI5 491 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 MYLIPQ8WY64 445 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 GJA10Q969M2 543 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 SEMA6BQ9H3T3 888 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 PDLIM7Q9NR12 457 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 SLC9A2Q9UBY0 812 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.93■□□□□ 0.46
CHD3-215ENST00000572750 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
CHD3-215ENST00000572750 MSH4O15457 936 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 SLC37A4O43826 429 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 PPFIA4O75335 1185 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 CCNE2O96020 404 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 TCF7P36402 384 aaPredicted RBP17.92■□□□□ 0.46
CHD3-215ENST00000572750 PSEN2P49810 448 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 MFSD10Q14728 455 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
CHD3-215ENST00000572750 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 C16orf70Q9BSU1 422 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 TTYH1Q9H313 450 aaPredicted RBP17.92■□□□□ 0.46
CHD3-215ENST00000572750 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
CHD3-215ENST00000572750 KIF3AQ9Y496 699 aa17.92■□□□□ 0.46
CHD3-215ENST00000572750 CYP3A7-CYP3A51PA0A087WV96 503 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 KIF28PB7ZC32 967 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 WNT7AO00755 349 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 DHX15O43143 795 aaKnown RBP17.91■□□□□ 0.46
CHD3-215ENST00000572750 B4GALT4O60513 344 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 CCNT1O60563 726 aaKnown RBP17.91■□□□□ 0.46
CHD3-215ENST00000572750 CLTBP09497 229 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 CYP3A7P24462 503 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 ACTR2P61160 394 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 KIAA0753Q2KHM9 967 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 Q4G0T1 1027 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 ZNF697Q5TEC3 545 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 MOXD1Q6UVY6 613 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 SH3RF1Q7Z6J0 888 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 MBOAT7Q96N66 472 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 KATNAL1Q9BW62 490 aa17.91■□□□□ 0.46
CHD3-215ENST00000572750 REV3LO60673 3130 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 WDR81Q562E7 1941 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
CHD3-215ENST00000572750 NFRKBQ6P4R8 1299 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 SNX21Q969T3 373 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 TRPV6Q9H1D0 765 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 TRMT13Q9NUP7 481 aaKnown RBP17.9■□□□□ 0.46
CHD3-215ENST00000572750 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
CHD3-215ENST00000572750 H3BRB1 525 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 HAS3O00219 553 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 TNFRSF10AO00220 468 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 GCFC2P16383 781 aaKnown RBP17.89■□□□□ 0.45
CHD3-215ENST00000572750 MARK3P27448 753 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
CHD3-215ENST00000572750 LRCH2Q5VUJ6 765 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 ETNPPLQ8TBG4 499 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 SEPT1Q8WYJ6 367 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 SLC5A5Q92911 643 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 TOX2Q96NM4 488 aa17.89■□□□□ 0.45
CHD3-215ENST00000572750 FOXP1Q9H334 677 aaPredicted RBP17.89■□□□□ 0.45
CHD3-215ENST00000572750 TUT1Q9H6E5 874 aaKnown RBP17.89■□□□□ 0.45
CHD3-215ENST00000572750 ZNF215Q9UL58 517 aaPredicted RBP17.89■□□□□ 0.45
CHD3-215ENST00000572750 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 H3BQV1 296 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
CHD3-215ENST00000572750 CHMP2AO43633 222 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 GAS7O60861 476 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 CD4P01730 458 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 PPP4R3AQ6IN85 833 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 C7orf31Q8N865 590 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 USP38Q8NB14 1042 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 SYMPKQ92797 1274 aaKnown RBP17.88■□□□□ 0.45
CHD3-215ENST00000572750 TRIM43Q96BQ3 446 aaPredicted RBP17.88■□□□□ 0.45
CHD3-215ENST00000572750 PCYT2Q99447 389 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 TBC1D22BQ9NU19 505 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 TMEM39AQ9NV64 488 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 HDAC6Q9UBN7 1215 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 PRKAG2Q9UGJ0 569 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 TBX21Q9UL17 535 aa17.88■□□□□ 0.45
CHD3-215ENST00000572750 EMSYQ7Z589 1322 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms