RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TCF7P36402 384 aaPredicted RBP20.78■□□□□ 0.92
CHD3-214ENST00000572579 IKBKEQ14164 716 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 RTN1Q16799 776 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 TJAP1Q5JTD0 557 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 RUFY4Q6ZNE9 571 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 ZBTB10Q96DT7 871 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 RIC8AQ9NPQ8 531 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 TMEM260Q9NX78 707 aa20.78■□□□□ 0.92
CHD3-214ENST00000572579 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 CTSHP09668 335 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 GRB10Q13322 594 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 MARCH8Q5T0T0 291 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 FAM117BQ6P1L5 589 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 ASB2Q96Q27 587 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 RAD9AQ99638 391 aa20.77■□□□□ 0.92
CHD3-214ENST00000572579 RBM28Q9NW13 759 aaKnown RBP20.77■□□□□ 0.92
CHD3-214ENST00000572579 PTPRSQ13332 1948 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.76■□□□□ 0.91
CHD3-214ENST00000572579 SPDYE3A6NKU9 549 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 CHRNA1P02708 482 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 ARP10275 920 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 MARK3P27448 753 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 HSPA4P34932 840 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 CLK2P49760 499 aaKnown RBP20.76■□□□□ 0.91
CHD3-214ENST00000572579 ARHGAP4P98171 946 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 MTMR1Q13613 665 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 FAM26DQ5JW98 314 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 MICALL1Q8N3F8 863 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
CHD3-214ENST00000572579 SEPT1Q8WYJ6 367 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 MXRA8Q9BRK3 442 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 KCNH7Q9NS40 1196 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 SNX14Q9Y5W7 946 aa20.76■□□□□ 0.91
CHD3-214ENST00000572579 LINC01553A4QN01 128 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 GOLGA8AA7E2F4 631 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 NAPAP54920 295 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 TFF2Q03403 129 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 APOBRQ0VD83 1088 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 ITGB3BPQ13352 177 aaPredicted RBP20.75■□□□□ 0.91
CHD3-214ENST00000572579 GIMAP8Q8ND71 665 aaPredicted RBP20.75■□□□□ 0.91
CHD3-214ENST00000572579 SUGCTQ9HAC7 445 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 BARHL2Q9NY43 387 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 THEGQ9P2T0 379 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 EMSYQ7Z589 1322 aa20.75■□□□□ 0.91
CHD3-214ENST00000572579 SMCO2A6NFE2 343 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 KRT32Q14532 448 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 CDHR1Q96JP9 859 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 ZBED2Q9BTP6 218 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 DOCK5Q9H7D0 1870 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 ZNF215Q9UL58 517 aaPredicted RBP20.74■□□□□ 0.91
CHD3-214ENST00000572579 NRCAMQ92823 1304 aa20.74■□□□□ 0.91
CHD3-214ENST00000572579 MBLAC1A4D2B0 266 aaPredicted RBP20.73■□□□□ 0.91
CHD3-214ENST00000572579 MEIS1O00470 390 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 MAFGO15525 162 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 CAND2O75155 1236 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 ERVK-21P61565 698 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 HTRA4P83105 476 aaPredicted RBP20.73■□□□□ 0.91
CHD3-214ENST00000572579 MGAT3Q09327 533 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 PKN1Q16512 942 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 Q6ZUG5 572 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 RPAINQ86UA6 219 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 GDPD5Q8WTR4 605 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 CRYGNQ8WXF5 182 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 JAKMIP1Q96N16 626 aaKnown RBP20.73■□□□□ 0.91
CHD3-214ENST00000572579 ANO3Q9BYT9 981 aa20.73■□□□□ 0.91
CHD3-214ENST00000572579 EFCAB14O75071 495 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 GNAT1P11488 350 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 BMP1P13497 986 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 ADCY7P51828 1080 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 MRPS5P82675 430 aaKnown RBP20.72■□□□□ 0.91
CHD3-214ENST00000572579 PPFIA1Q13136 1202 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 CEP55Q53EZ4 464 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 PPP1R18Q6NYC8 613 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 EHMT1Q9H9B1 1298 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 AGO4Q9HCK5 861 aaKnown RBP20.72■□□□□ 0.91
CHD3-214ENST00000572579 MTUS1Q9ULD2 1270 aa20.72■□□□□ 0.91
CHD3-214ENST00000572579 EDIL3O43854 480 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 PPFIA3O75145 1194 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 CCNE2O96020 404 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
CHD3-214ENST00000572579 SREBF1P36956 1147 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 RCAN1P53805 252 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 GRIK4Q16099 956 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 PFKFB3Q16875 520 aaPredicted RBP20.71■□□□□ 0.91
CHD3-214ENST00000572579 MYOCDQ8IZQ8 938 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 FBXL16Q8N461 479 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 SP7Q8TDD2 431 aaPredicted RBP20.71■□□□□ 0.91
CHD3-214ENST00000572579 SEPT8Q92599 483 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 SYMPKQ92797 1274 aaKnown RBP20.71■□□□□ 0.91
CHD3-214ENST00000572579 BRF1Q92994 677 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 TOP1MTQ969P6 601 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 AGXT2Q9BYV1 514 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 JPH1Q9HDC5 661 aaPredicted RBP20.71■□□□□ 0.91
CHD3-214ENST00000572579 ERAP1Q9NZ08 941 aa20.71■□□□□ 0.91
CHD3-214ENST00000572579 FAM86B1E9PN63 330 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 ATG7O95352 703 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 FAM86B2P0C5J1 330 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms