RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
CHMP6-202ENST00000571457 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
CHMP6-202ENST00000571457 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 NEDD9Q14511 834 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 OSBPL7Q9BZF2 842 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 RC3H2Q9HBD1 1191 aaKnown RBP13.16□□□□□ -0.3
CHMP6-202ENST00000571457 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
CHMP6-202ENST00000571457 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 TTC3P53804 2025 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 KAT6AQ92794 2004 aa13.16□□□□□ -0.3
CHMP6-202ENST00000571457 NRCAMQ92823 1304 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 ENPP3O14638 875 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 OPLAHO14841 1288 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 STAM2O75886 525 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 NUBP1P53384 320 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
CHMP6-202ENST00000571457 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
CHMP6-202ENST00000571457 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
CHMP6-202ENST00000571457 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
CHMP6-202ENST00000571457 PHF7Q9BWX1 381 aaPredicted RBP13.15□□□□□ -0.3
CHMP6-202ENST00000571457 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
CHMP6-202ENST00000571457 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
CHMP6-202ENST00000571457 ZNF213O14771 459 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 KDM4AO75164 1064 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 DGKIO75912 1065 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 CSPG5O95196 566 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 CHRNA1P02708 482 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 POLR2MP0CAP2 368 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 GHRP10912 638 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CHMP6-202ENST00000571457 ADAM17P78536 824 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 CAMK1Q14012 370 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
CHMP6-202ENST00000571457 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 LMBR1Q8WVP7 490 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
CHMP6-202ENST00000571457 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
CHMP6-202ENST00000571457 NEDD4P46934 1319 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ZBTB5O15062 677 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ATF7P17544 494 aaPredicted RBP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 AVPR2P30518 371 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ICAM3P32942 547 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 NRIP1P48552 1158 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 LPIN1Q14693 890 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ZNF589Q86UQ0 364 aaPredicted RBP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 RPGRIP1Q96KN7 1286 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 GPR20Q99678 358 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
CHMP6-202ENST00000571457 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
CHMP6-202ENST00000571457 ZNF292O60281 2723 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 FIBPO43427 364 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 ITGB1P05556 798 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 DNAJB1P25685 340 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
CHMP6-202ENST00000571457 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
CHMP6-202ENST00000571457 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
CHMP6-202ENST00000571457 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 FTHL17Q9BXU8 183 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 TLE6Q9H808 572 aa13.12□□□□□ -0.31
CHMP6-202ENST00000571457 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 PDE1AP54750 535 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
CHMP6-202ENST00000571457 MGAT3Q09327 533 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 FBXO47Q5MNV8 452 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 ADGRD2Q7Z7M1 963 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
CHMP6-202ENST00000571457 NPAS4Q8IUM7 802 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
CHMP6-202ENST00000571457 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
CHMP6-202ENST00000571457 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms