RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PPARGC1AQ9UBK2 798 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 HERC5Q9UII4 1024 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 DMTF1Q9Y222 760 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SNX14Q9Y5W7 946 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SNCAIPQ9Y6H5 919 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SQORQ9Y6N5 450 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SMCHD1A6NHR9 2005 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 DUOX1Q9NRD9 1551 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CCDC171Q6TFL3 1326 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 SBF1O95248 1867 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 FER1L6Q2WGJ9 1857 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 SYNJ2BP-COX16A0A087WUM0 186 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 A0A1B0GVC2 190 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 SYNDIG1LA6NDD5 238 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TSPY2A6NKD2 308 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 INO80B-WBP1J3KQ70 363 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 GPR182O15218 404 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CLASP2O75122 1294 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 FRAT2O75474 233 aaPredicted RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 MTRF1O75570 445 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 REC8O95072 547 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 LARGE1O95461 756 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TSPY3P0CV98 308 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TSPY8P0CW00 308 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 SFTPCP11686 197 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 HSD3B1P14060 373 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 MX2P20592 715 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 FGFR2P21802 821 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 PTPREP23469 700 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 EIF4BP23588 611 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 KLRK1P26718 216 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 GALNSP34059 522 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 ZAP70P43403 619 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RBM6P78332 1123 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 SARNPP82979 210 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 TSPY1Q01534 308 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 MECOMQ03112 1051 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CHRNDQ07001 517 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 DDR1Q08345 913 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 ZBTB17Q13105 803 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 GRM1Q13255 1194 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 NFIXQ14938 502 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RABEP1Q15276 862 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TXNRD1Q16881 649 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 INF2Q27J81 1249 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TTC39AQ5SRH9 613 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 HECTD3Q5T447 861 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 SWT1Q5T5J6 900 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 XP32Q5T750 250 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 INTS11Q5TA45 600 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 VPS53Q5VIR6 699 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 PRPF40BQ6NWY9 871 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 TRIM67Q6ZTA4 783 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 USP51Q70EK9 711 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RUFY3Q7L099 469 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CDC37L1Q7L3B6 337 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 BEND5Q7L4P6 421 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 FASTKD5Q7L8L6 764 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 MILR1Q7Z6M3 343 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RNF180Q86T96 592 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TBC1D1Q86TI0 1168 aaPredicted RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 DZIP1Q86YF9 867 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 MYLK4Q86YV6 388 aaPredicted RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 ANKRD18AQ8IVF6 992 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 AFAP1L2Q8N4X5 818 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 ZGPATQ8N5A5 531 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 FAM26EQ8N5C1 309 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 NKX2-3Q8TAU0 364 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 USP33Q8TEY7 942 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 ANKRD49Q8WVL7 239 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 ZNF75CPQ92670 426 aaPredicted RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 ARHGEF2Q92974 986 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 NINJ1Q92982 152 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TTC17Q96AE7 1141 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 MTMR8Q96EF0 704 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CHAMP1Q96JM3 812 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TCEANC2Q96MN5 208 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 FAM129BQ96TA1 746 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TCHPQ9BT92 498 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 MAK16Q9BXY0 300 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 UPF3BQ9BZI7 483 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 SLC13A1Q9BZW2 595 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 UNC45AQ9H3U1 944 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 NCOA5Q9HCD5 579 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 ALG13Q9NP73 1137 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 GPR108Q9NPR9 543 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 PIH1D3Q9NQM4 214 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 ANKEF1Q9NU02 776 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 KLHL11Q9NVR0 708 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 PAG1Q9NWQ8 432 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 TMOD4Q9NZQ9 345 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 WDR35Q9P2L0 1181 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 DKK3Q9UBP4 350 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 CLIP2Q9UDT6 1046 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 BLOC1S6Q9UL45 172 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 PHTF1Q9UMS5 762 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RTCBQ9Y3I0 505 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms