RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 ZNF287Q9HBT7 754 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 INTS9Q9NV88 658 aaKnown RBP10.88□□□□□ -0.67
USP43-203ENST00000570827 SALL4Q9UJQ4 1053 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 E9PMD0 336 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 PGRMC1O00264 195 aaKnown RBP10.88□□□□□ -0.67
USP43-203ENST00000570827 LRRN2O75325 713 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 FLOT1O75955 427 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 SERPING1P05155 500 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 PDXDC1Q6P996 788 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 TAF1DQ9H5J8 278 aaPredicted RBP10.88□□□□□ -0.67
USP43-203ENST00000570827 ARMCX3Q9UH62 379 aaPredicted RBP10.88□□□□□ -0.67
USP43-203ENST00000570827 CHORDC1Q9UHD1 332 aaPredicted RBP10.88□□□□□ -0.67
USP43-203ENST00000570827 PNMA2Q9UL42 364 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
USP43-203ENST00000570827 SLIT3O75094 1523 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 GCNT3O95395 438 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 ADCY7P51828 1080 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
USP43-203ENST00000570827 USH1GQ495M9 461 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 NAALADL2Q58DX5 795 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 CAPN12Q6ZSI9 719 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 SPATS2Q86XZ4 545 aaKnown RBP10.87□□□□□ -0.67
USP43-203ENST00000570827 CCDC105Q8IYK2 499 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 FAM84BQ96KN1 310 aaPredicted RBP10.87□□□□□ -0.67
USP43-203ENST00000570827 CTTNBP2NLQ9P2B4 639 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 AMFRQ9UKV5 643 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 TAL1P17542 331 aaPredicted RBP10.87□□□□□ -0.67
USP43-203ENST00000570827 ELF1P32519 619 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 HSD17B3P37058 310 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 KCNB1Q14721 858 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 KLHDC7AQ5VTJ3 777 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 FAM196AQ6ZSG2 479 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 GDAP1Q8TB36 358 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 ZNF507Q8TCN5 953 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 SH3RF3Q8TEJ3 882 aaPredicted RBP10.87□□□□□ -0.67
USP43-203ENST00000570827 FAM167BQ9BTA0 163 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 TBK1Q9UHD2 729 aa10.87□□□□□ -0.67
USP43-203ENST00000570827 OPLAHO14841 1288 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 MMEP08473 750 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 PPP1R2P41236 205 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 PPP2R2AP63151 447 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 EXOC3L4Q17RC7 722 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 GRIPAP1Q4V328 841 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 SPICE1Q8N0Z3 855 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 PNPLA7Q6ZV29 1317 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 XRCC5P13010 732 aaKnown RBP10.86□□□□□ -0.67
USP43-203ENST00000570827 TNFAIP3P21580 790 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 UBXN2AP68543 259 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 SEPT7Q16181 437 aaKnown RBP10.86□□□□□ -0.67
USP43-203ENST00000570827 MFSD14BQ5SR56 506 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 NSRP1Q9H0G5 558 aaKnown RBP10.86□□□□□ -0.67
USP43-203ENST00000570827 ANKRD62A6NC57 917 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 ITGA4P13612 1032 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 CYP2J2P51589 502 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 GRIK5Q16478 980 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 CNBD1Q8NA66 436 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 KIAA0895Q8NCT3 520 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 FMO2Q99518 471 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
USP43-203ENST00000570827 NOC2LQ9Y3T9 749 aaKnown RBP10.86□□□□□ -0.67
USP43-203ENST00000570827 FAM107AO95990 144 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 SLC9A1P19634 815 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 MTMR3Q13615 1198 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 PHLDB2Q86SQ0 1253 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 HOOK3Q86VS8 718 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 KIAA0825Q8IV33 1275 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 KIF2BQ8N4N8 673 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 MTRF1LQ9UGC7 380 aaKnown RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 MRC1P22897 1456 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 SPOPO43791 374 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 SNX1Q13596 522 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 TRIP13Q15645 432 aaPredicted RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 KCTD1Q719H9 257 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 TAOK3Q9H2K8 898 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 EMILIN3Q9NT22 766 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 DDX25Q9UHL0 483 aaKnown RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 ATP6V0A2Q9Y487 856 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 SORBS3O60504 671 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 MYBL1P10243 752 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 GJB7Q6PEY0 223 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 SUGP1Q8IWZ8 645 aaKnown RBP10.85□□□□□ -0.67
USP43-203ENST00000570827 VGLL2Q8N8G2 317 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 ERGIC2Q96RQ1 377 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 CCSER1Q9C0I3 900 aa10.85□□□□□ -0.67
USP43-203ENST00000570827 AZI2Q9H6S1 392 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms