RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NIPA1Q7RTP0 329 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SEPT1Q8WYJ6 367 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 BRF1Q92994 677 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MXRA8Q9BRK3 442 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CUL9Q8IWT3 2517 aa19.55■□□□□ 0.72
MAP1LC3B-208ENST00000570189 GSTTP1A0A1W2PQM5 241 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SMCO2A6NFE2 343 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PRPF3O43395 683 aaKnown RBP19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SCG2P13521 617 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CPA1P15085 419 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ADD1P35611 737 aaKnown RBP19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 TCF7P36402 384 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 KCNJ6P48051 423 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 APOBRQ0VD83 1088 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 TRIM50Q86XT4 487 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CCDC12Q8WUD4 166 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CRYGNQ8WXF5 182 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ZMYND12Q9H0C1 365 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PRDM12Q9H4Q4 367 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 TELO2Q9Y4R8 837 aa19.54■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RSPH10B2B2RC85 870 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 KIF28PB7ZC32 967 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MEIS1O00470 390 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 TREHO43280 583 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 LGR5O75473 907 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NEFLP07196 543 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RSPH10BP0C881 870 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 MYOGP15173 224 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 POU3F3P20264 500 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 NTRK3Q16288 839 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 FAM26DQ5JW98 314 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 LMBR1Q8WVP7 490 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ERAP1Q9NZ08 941 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 WDR81Q562E7 1941 aa19.53■□□□□ 0.72
MAP1LC3B-208ENST00000570189 COL4A6Q14031 1691 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 DLL1O00548 723 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CA3P07451 260 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 CYP3A4P08684 503 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 THPOP40225 353 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 IKBKEQ14164 716 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ADGRE1Q14246 886 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PKN1Q16512 942 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 PLEKHG4Q58EX7 1191 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RUFY3Q7L099 469 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 RNF26Q9BY78 433 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SMARCAD1Q9H4L7 1026 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 ZSWIM6Q9HCJ5 1215 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 JPH1Q9HDC5 661 aaPredicted RBP19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SETD4Q9NVD3 440 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 SLC9A2Q9UBY0 812 aa19.52■□□□□ 0.72
MAP1LC3B-208ENST00000570189 REV3LO60673 3130 aa19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 MBLAC1A4D2B0 266 aaPredicted RBP19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 RPLP2P05387 115 aaKnown RBP19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 IFNAR1P17181 557 aa19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TCTN1Q2MV58 587 aa19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TAF2Q6P1X5 1199 aa19.51■□□□□ 0.71
MAP1LC3B-208ENST00000570189 MYH9P35579 1960 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ATG7O95352 703 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 GJB5O95377 273 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ARHGAP4P98171 946 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TAP1Q03518 808 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 UTP14CQ5TAP6 766 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 CYP2W1Q8TAV3 490 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 VCANP13611 3396 aa19.5■□□□□ 0.71
MAP1LC3B-208ENST00000570189 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 GNA11P29992 359 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 DEFB103AP81534 67 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SP4Q02446 784 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TOB2Q14106 344 aaPredicted RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PLPPR4Q7Z2D5 763 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 USP38Q8NB14 1042 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 APBB2Q92870 758 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PCYT2Q99447 389 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SDF4Q9BRK5 362 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 AGO4Q9HCK5 861 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 C6orf50Q9HD87 102 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SH3GLB2Q9NR46 395 aa19.49■□□□□ 0.71
MAP1LC3B-208ENST00000570189 IGLV3-22A0A075B6J6 115 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 IGKV6D-21A0A0A0MT36 114 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TLL1O43897 1013 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ARP10275 920 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 SLC26A2P50443 739 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PPFIA1Q13136 1202 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ITGB3BPQ13352 177 aaPredicted RBP19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 CCDC148Q8NFR7 591 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 DBF4BQ8NFT6 615 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 ZNF274Q96GC6 653 aaPredicted RBP19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 RAD9AQ99638 391 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 TMEM260Q9NX78 707 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
MAP1LC3B-208ENST00000570189 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms