RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 GRB10Q13322 594 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 MTMR1Q13613 665 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 MCM6Q14566 821 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PLS1Q14651 629 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 SNRNP48Q6IEG0 339 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 DDX12PQ92771 950 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PANX2Q96RD6 677 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 RMDN3Q96TC7 470 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 EDEM3Q9BZQ6 932 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 A0A1B0GTH6 734 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 POTEMA6NI47 508 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 VWA5AO00534 786 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 EPB41P11171 864 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 HOXA13P31271 388 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 EPHX2P34913 555 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 CYLC1P35663 651 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 COPB1P53618 953 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 UBXN1Q04323 297 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PPIL2Q13356 520 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 TUBB2AQ13885 445 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 VWA3BQ502W6 1294 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 SYT2Q8N9I0 419 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 JPH2Q9BR39 696 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 SYT17Q9BSW7 474 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 TUBB2BQ9BVA1 445 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 RAVER2Q9HCJ3 691 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 JADE2Q9NQC1 790 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 MEIS1O00470 390 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 EIF3DO15371 548 aaKnown RBP eCLIP6.68□□□□□ -1.34
CYLD-216ENST00000569891 VEGFAP15692 232 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 STX17P56962 302 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 STXBP2Q15833 593 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 MAN2A1Q16706 1144 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 EDRF1Q3B7T1 1238 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 TCP11X2Q5H9J9 407 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 CATSPERGQ6ZRH7 1159 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 GRAMD1CQ8IYS0 662 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 ANKRD35Q8N283 1001 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 NLGN2Q8NFZ4 835 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 KIF18AQ8NI77 898 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PLIN2Q99541 437 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 EIF2AK1Q9BQI3 630 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 NOC4LQ9BVI4 516 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 SRRTQ9BXP5 876 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 TMEM206Q9H813 350 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 LUC7L2Q9Y383 392 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 PLXNB2O15031 1838 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PPP1R3GB7ZBB8 358 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MSH4O15457 936 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PSAPP07602 524 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MAPTP10636 758 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 ZNF18P17022 549 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 INPP5BP32019 993 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PRCPP42785 496 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 HMGCS2P54868 508 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 KRT83P78385 493 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 NCAPHQ15003 741 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 FAM160B1Q5W0V3 765 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MIS18BP1Q6P0N0 1132 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 GADL1Q6ZQY3 521 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 HVCN1Q96D96 273 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 BAG1Q99933 345 aaPredicted RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 ATG2AQ2TAZ0 1938 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 TRAF5O00463 557 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 N4BP1O75113 896 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 TRIM21P19474 475 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 TBC1D8BQ0IIM8 1120 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 SNAPC2Q13487 334 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 NOM1Q5C9Z4 860 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 DYMQ7RTS9 669 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 VPS36Q86VN1 386 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 TPH2Q8IWU9 490 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
CYLD-216ENST00000569891 ETNPPLQ8TBG4 499 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PARVGQ9HBI0 331 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 ANKEF1Q9NU02 776 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 CCDC175P0C221 793 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 KRT13P13646 458 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 QARSP47897 775 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 PSMC5P62195 406 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 COASYQ13057 564 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 KCTD2Q14681 263 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 CDKAL1Q5VV42 579 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MTERF4Q7Z6M4 381 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 SYCP3Q8IZU3 236 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 KIAA1524Q8TCG1 905 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 STAMQ92783 540 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 SLC10A4Q96EP9 437 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 FAM167AQ96KS9 214 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 C17orf75Q9HAS0 396 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PGAP2Q9UHJ9 254 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 FRMD4BQ9Y2L6 1034 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 POTEB2H3BUK9 544 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 FOXN1O15353 648 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms