RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820		A0A1W2PRG0	241 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	PRPH	P41219	470 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	PTGER2	P43116	358 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	SKOR1	P84550	965 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	GRIK3	Q13003	919 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	LETM2	Q2VYF4	491 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	MICALCL	Q6ZW33	695 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	PAGE5	Q96GU1	130 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	SH3GL3	Q99963	347 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	VPS16	Q9H269	839 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	LIMA1	Q9UHB6	759 aa	Known RBP	13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	PGAP2	Q9UHJ9	254 aa		13.21	□□□□□ -0.29
SPG7-222	ENST00000569820	LTBP3	Q9NS15	1303 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	CCNT1	O60563	726 aa	Known RBP	13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	NF2	P35240	595 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	CLK2	P49760	499 aa	Known RBP	13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	C2orf54	Q08AI8	447 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	PDCL	Q13371	301 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	QRICH1	Q2TAL8	776 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	PDXDC2P	Q6P474	469 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	CD248	Q9HCU0	757 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	MYOZ2	Q9NPC6	264 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	SYNPO2	Q9UMS6	1093 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	CTNND2	Q9UQB3	1225 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	BCS1L	Q9Y276	419 aa		13.21	□□□□□ -0.3
SPG7-222	ENST00000569820	PPP1R3G	B7ZBB8	358 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	EDIL3	O43854	480 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	EPB41	P11171	864 aa	Known RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	PAX7	P23759	505 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	PRELP	P51888	382 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	MRPL12	P52815	198 aa	Known RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	COPB1	P53618	953 aa	Known RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	SPAG1	Q07617	926 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	TBC1D8B	Q0IIM8	1120 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	ORC2	Q13416	577 aa	Predicted RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	CDC37	Q16543	378 aa	Predicted RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	DTHD1	Q6ZMT9	781 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	N4BP2L2	Q92802	583 aa	Predicted RBP	13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	GSDMA	Q96QA5	445 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	TAB2	Q9NYJ8	693 aa		13.2	□□□□□ -0.3
SPG7-222	ENST00000569820	LRRC10B	A6NIK2	292 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	KRT86	O43790	486 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	TBC1D12	O60347	775 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	OR52Z1	P0C646	297 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	CASP1	P29466	404 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	ZNF280A	P59817	542 aa	Predicted RBP	13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	HERVK_113	P62684	666 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	RASSF7	Q02833	373 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	UBE2S	Q16763	222 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	KIAA1328	Q86T90	577 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	SLC24A3	Q9HC58	644 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	ZBTB21	Q9ULJ3	1066 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	ANO9	A1A5B4	782 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	PP2D1	A8MPX8	630 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	PDE2A	O00408	941 aa	Predicted RBP	13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	ZNF185	O15231	689 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	EGFR	P00533	1210 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	KRT83	P78385	493 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	DPYD	Q12882	1025 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	TNIP1	Q15025	636 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	PREPL	Q4J6C6	727 aa	Predicted RBP	13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	TTMP	Q5BVD1	217 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	YTHDF3	Q7Z739	585 aa	Known RBP	13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	OR8K1	Q8NGG5	319 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	RUBCN	Q92622	972 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	CUL5	Q93034	780 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	PYM1	Q9BRP8	204 aa	Known RBP	13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	JADE2	Q9NQC1	790 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	TFR2	Q9UP52	801 aa		13.19	□□□□□ -0.3
SPG7-222	ENST00000569820	HSF2BP	O75031	334 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	COBL	O75128	1261 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ECE1	P42892	770 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	TSR1	Q2NL82	804 aa	Known RBP	13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ALS2CL	Q60I27	953 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	MTR	Q99707	1265 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	HINFP	Q9BQA5	517 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ZEB2	O60315	1214 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	BMP3	P12645	472 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	IDE	P14735	1019 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	RPS12	P25398	132 aa	Known RBP	13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	RWDD2B	P57060	319 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	TRAF1	Q13077	416 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	KIAA1755	Q5JYT7	1200 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	BTNL9	Q6UXG8	535 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ACER1	Q8TDN7	264 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ZNF483	Q8TF39	744 aa	Predicted RBP	13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	ARL8A	Q96BM9	186 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	PAGR1	Q9BTK6	254 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	DISC1	Q9NRI5	854 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	KLC4	Q9NSK0	619 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	TMX2	Q9Y320	296 aa		13.18	□□□□□ -0.3
SPG7-222	ENST00000569820	KCNJ18	B7U540	433 aa		13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	TDP2	O95551	362 aa		13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	TNNI2	P48788	182 aa		13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	EPHB4	P54760	987 aa		13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	NAP1L1	P55209	391 aa	Known RBP	13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	MAP3K10	Q02779	954 aa		13.17	□□□□□ -0.3
SPG7-222	ENST00000569820	UBXN1	Q04323	297 aa		13.17	□□□□□ -0.3

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