RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 GSTTP1A0A1W2PQM5 241 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ESYT2A0FGR8 921 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 H3BRB1 525 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SOX1O00570 391 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 KIAA0355O15063 1070 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 CHMP2AO43633 222 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 PPFIA4O75335 1185 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 CD4P01730 458 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 PSEN1P49768 467 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 FPGSQ05932 587 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 NR5A1Q13285 461 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ITGB3BPQ13352 177 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 HIC1Q14526 733 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 XRRA1Q6P2D8 792 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 PIK3AP1Q6ZUJ8 805 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 TDHQ8IZJ6 230 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SLC43A3Q8NBI5 491 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 EMID1Q96A84 441 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ZBTB10Q96DT7 871 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF577Q9BSK1 485 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 C16orf70Q9BSU1 422 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 JPH1Q9HDC5 661 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SH3GLB2Q9NR46 395 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SETD4Q9NVD3 440 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SLC9A2Q9UBY0 812 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 TBX21Q9UL17 535 aa10.26□□□□□ -0.77
GTF3C1-210ENST00000569394 SCN10AQ9Y5Y9 1956 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 SCN5AQ14524 2016 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 CCDC194A0A1B0GVG4 234 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 BACH1O14867 736 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 EDIL3O43854 480 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 TDP2O95551 362 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 SMIM10L2BP0DMW5 78 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 XBP1P17861 261 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 ACTR2P61160 394 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 LETM2Q2VYF4 491 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 EARS2Q5JPH6 523 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 RETREG2Q8NC44 543 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 GIMAP8Q8ND71 665 aaPredicted RBP10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 SEPT1Q8WYJ6 367 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 CDHR1Q96JP9 859 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 NOC4LQ9BVI4 516 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 KATNAL1Q9BW62 490 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 RNPEPQ9H4A4 650 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 SAMM50Q9Y512 469 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 TRIOBPQ9H2D6 2365 aa10.25□□□□□ -0.77
GTF3C1-210ENST00000569394 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 C17orf102A2RUQ5 167 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 IPO5O00410 1097 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 MEIS1O00470 390 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 TREHO43280 583 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 ST18O60284 1047 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 MARCH6O60337 910 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 CCNE2O96020 404 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 F2P00734 622 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 CTSHP09668 335 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 SUPT20HL2P0C7V6 817 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 KRT2P35908 639 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 TRIM29Q14134 588 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 NONOQ15233 471 aaKnown RBP eCLIP10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 RABEP1Q15276 862 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 NPY5RQ15761 445 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 KRT40Q6A162 431 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 ZNF365Q70YC5 407 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 WASF1Q92558 559 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 ATP6V0A1Q93050 837 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 WNT8BQ93098 351 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 IL17RAQ96F46 866 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 RNPC3Q96LT9 517 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 FAM161BQ96MY7 647 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 SENP7Q9BQF6 1050 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■■■□□ 18
GTF3C1-210ENST00000569394 FTOQ9C0B1 505 aaKnown RBP eCLIP10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 GTF2IRD1Q9UHL9 959 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 STK36Q9NRP7 1315 aa10.24□□□□□ -0.77
GTF3C1-210ENST00000569394 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 GRXCR1A8MXD5 290 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 HAS3O00219 553 aa10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 CCNT1O60563 726 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-210ENST00000569394 CYP3A4P08684 503 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms