RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 REC8O95072 547 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 LEXMQ3ZCV2 418 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 VSIG10LQ86VR7 867 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ZBTB5O15062 677 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TREHO43280 583 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 LGALS2P05162 132 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 KCNA5P22460 613 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 NT5C2P49902 561 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ADAM17P78536 824 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 IKBKEQ14164 716 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TRIM50Q86XT4 487 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 DHX37Q8IY37 1157 aaKnown RBP12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ANP32EQ9BTT0 268 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 AMNQ9BXJ7 453 aa12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RC3H2Q9HBD1 1191 aaKnown RBP12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 DMDP11532 3685 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 KLRF2D3W0D1 207 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SNPHO15079 494 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 EFCAB14O75071 495 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SMIM10L2AP0DMW4 78 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SMIM10L2BP0DMW5 78 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 THPOP40225 353 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GRM4Q14833 912 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MYOCDQ8IZQ8 938 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SNX21Q969T3 373 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PIGSQ96S52 555 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
CHRFAM7A-206ENST00000569278 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RSPH10B2B2RC85 870 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 CTSHP09668 335 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RSPH10BP0C881 870 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GSPT1P15170 499 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 COL9A3Q14050 684 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 INPP4AQ96PE3 977 aaPredicted RBP12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RNPEPQ9H4A4 650 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 WDR70Q9NW82 654 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 INSL6Q9Y581 213 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PCDHA1Q9Y5I3 950 aa12.92□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 H3BQ06 376 aaPredicted RBP12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 H3BRB1 525 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 LTBRP36941 435 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TROAPQ12815 778 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GJD3Q8N144 294 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 LMBR1Q8WVP7 490 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GPR20Q99678 358 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 TUT1Q9H6E5 874 aaKnown RBP12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 DIAPH3Q9NSV4 1193 aa12.91□□□□□ -0.34
CHRFAM7A-206ENST00000569278 C17orf102A2RUQ5 167 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 H3BNC9 293 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 AMHP03971 560 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 CYP21A2P08686 494 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ICAM3P32942 547 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ANTXR2P58335 489 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 ZP2Q05996 745 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PTCRAQ6ISU1 281 aaPredicted RBP12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 FCHSD1Q86WN1 690 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 KRT23Q9C075 422 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 SETD4Q9NVD3 440 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 HCN4Q9Y3Q4 1203 aa12.9□□□□□ -0.34
CHRFAM7A-206ENST00000569278 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 HIP1O00291 1037 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CHRNA1P02708 482 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 TGFB3P10600 412 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 CCND2P30279 289 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 PTH1RQ03431 593 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 MGAT3Q09327 533 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
CHRFAM7A-206ENST00000569278 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms