RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 HAS1Q92839 578 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 FERMT2Q96AC1 680 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 RAB34Q9BZG1 259 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 SENP6Q9GZR1 1112 aaPredicted RBP10.28□□□□□ -0.76
CHD9-219ENST00000569225 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 STARD7Q9NQZ5 370 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.28□□□□□ -0.76
CHD9-219ENST00000569225 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 PCDHB6Q9Y5E3 794 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 PCDHA10Q9Y5I2 948 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 WNT7AO00755 349 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 CHMP2AO43633 222 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 BRD1O95696 1058 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 CCNE2O96020 404 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 LGALS2P05162 132 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 SUPT20HL2P0C7V6 817 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 TXKP42681 527 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 SLC26A2P50443 739 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 PTGDRQ13258 359 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 PPP2R5CQ13362 524 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 NBR1Q14596 966 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 UTP14CQ5TAP6 766 aaKnown RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 MIER3Q7Z3K6 550 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 DIS3LQ8TF46 1054 aaKnown RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 GLG1Q92896 1179 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 SMARCAD1Q9H4L7 1026 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 TTC12Q9H892 705 aaPredicted RBP10.27□□□□□ -0.76
CHD9-219ENST00000569225 DISC1Q9NRI5 854 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 EMSYQ7Z589 1322 aa10.27□□□□□ -0.76
CHD9-219ENST00000569225 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
CHD9-219ENST00000569225 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 ATG7O95352 703 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 F2P00734 622 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 ZNF286BP0CG31 522 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 PRPHP41219 470 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 ATL3Q6DD88 541 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 UBE2Q1Q7Z7E8 422 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 GJA10Q969M2 543 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 ERAP1Q9NZ08 941 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 VAV3Q9UKW4 847 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
CHD9-219ENST00000569225 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
CHD9-219ENST00000569225 KIAA0100Q14667 2235 aaKnown RBP10.27□□□□□ -0.77
CHD9-219ENST00000569225 H3BRB1 525 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 DKC1O60832 514 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD9-219ENST00000569225 LGR5O75473 907 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 PSEN2P49810 448 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 STAT5BP51692 787 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 CHMP4BP1P59074 171 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 ATP2C1P98194 919 aaPredicted RBP10.26□□□□□ -0.77
CHD9-219ENST00000569225 PKP1Q13835 747 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 MFSD10Q14728 455 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 ARL6IP4Q66PJ3 421 aaKnown RBP10.26□□□□□ -0.77
CHD9-219ENST00000569225 NCAPH2Q6IBW4 605 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 DTHD1Q6ZMT9 781 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 PLPPR4Q7Z2D5 763 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 C7orf31Q8N865 590 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 C16orf70Q9BSU1 422 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
CHD9-219ENST00000569225 ZNF302Q9NR11 478 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
CHD9-219ENST00000569225 IGKV6D-21A0A0A0MT36 114 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 CAPN15O75808 1086 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.775e-7■■■□□ 15.8
CHD9-219ENST00000569225 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
CHD9-219ENST00000569225 ITGA7Q13683 1181 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 SF3A1Q15459 793 aaKnown RBP10.25□□□□□ -0.77
CHD9-219ENST00000569225 KIAA0753Q2KHM9 967 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 C1orf53Q5VUE5 145 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 SWSAP1Q6NVH7 229 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 PDXDC2PQ6P474 469 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 B3GNT9Q6UX72 402 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 AFAP1L1Q8TED9 768 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 KAT2BQ92831 832 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 CFAP45Q9UL16 551 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 ARVCFO00192 962 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 DDIT3P35638 169 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 TECP42680 631 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
CHD9-219ENST00000569225 PSMC6P62333 389 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 PDIA5Q14554 519 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms