RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 GCOM1H8Y6P7 765 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 ZBTB43O43298 467 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 CYTH3O43739 400 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 ZEB2O60315 1214 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 POLR2MP0CAP2 368 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 NKX3-2P78367 333 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 GHRHRQ02643 423 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 LRRC41Q15345 812 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 NOL8Q76FK4 1167 aaKnown RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 SYTL5Q8TDW5 730 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 RMDN3Q96TC7 470 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 SENP6Q9GZR1 1112 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
CAPN3-219ENST00000569136 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
CAPN3-219ENST00000569136 RLFQ13129 1914 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 NKRFO15226 690 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN3-219ENST00000569136 EIF3JO75822 258 aaKnown RBP10.59□□□□□ -0.71
CAPN3-219ENST00000569136 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 EDNRBP24530 442 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 HSD17B4P51659 736 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 GJA9P57773 515 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 ANAPC15P60006 121 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 STXBP2Q15833 593 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-219ENST00000569136 ARHGEF16Q5VV41 709 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 APOA5Q6Q788 366 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 HOMER1Q86YM7 354 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 SRBD1Q8N5C6 995 aaKnown RBP10.59□□□□□ -0.71
CAPN3-219ENST00000569136 TPCN2Q8NHX9 752 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
CAPN3-219ENST00000569136 SEZ6LQ9BYH1 1024 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 AP5M1Q9H0R1 490 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
CAPN3-219ENST00000569136 CEP290O15078 2479 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 RBM47A0AV96 593 aaKnown RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CABYRO75952 493 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 PGK1P00558 417 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CFBP00751 764 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CST5P28325 142 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 GDF10P55107 478 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 EVCP57679 992 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CLDN10P78369 228 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 RTN1Q16799 776 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 DUSP28Q4G0W2 176 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 GNASQ5JWF2 1037 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 TAPT1Q6NXT6 567 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 KCNV1Q6PIU1 500 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 Q6ZUG5 572 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 TMTC3Q6ZXV5 915 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 KLHDC9Q8NEP7 349 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 CUL5Q93034 780 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 TAAR1Q96RJ0 339 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 UPF3AQ9H1J1 476 aaKnown RBP10.58□□□□□ -0.72
CAPN3-219ENST00000569136 PSTPIP2Q9H939 334 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 BRPF3Q9ULD4 1205 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
CAPN3-219ENST00000569136 MKI67P46013 3256 aaKnown RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 MYH8P13535 1937 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 KLF18A0A0U1RQI7 1052 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 SPINT1O43278 529 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 KPNA6O60684 536 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 CTSOP43234 321 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 TTLL4Q14679 1199 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 KCNA10Q16322 511 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 ANO1Q5XXA6 986 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 SLC30A10Q6XR72 485 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 BRF1Q92994 677 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 TCEANC2Q96MN5 208 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 ALDH8A1Q9H2A2 487 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
CAPN3-219ENST00000569136 ELP1O95163 1332 aa10.57□□□□□ -0.72
CAPN3-219ENST00000569136 FIGNL2A6NMB9 653 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 GOLGA8AA7E2F4 631 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 GOLGA8BA8MQT2 603 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 H0YGN5 161 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms