RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CFBP00751 764 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 LGALS2P05162 132 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 ITGB1P05556 798 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 MYCLP12524 364 aaPredicted RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 CLCN5P51795 746 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 CAMK1Q14012 370 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 STOX1Q6ZVD7 989 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 DGKHQ86XP1 1220 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 NPAS4Q8IUM7 802 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 ATP8B4Q8TF62 1192 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 TBC1D5Q92609 795 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 SEC62Q99442 399 aaKnown RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 PDCD2LQ9BRP1 358 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 MFSD1Q9H3U5 465 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 EHMT1Q9H9B1 1298 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 COL20A1Q9P218 1284 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
SMG1-216ENST00000569122 SORCS3Q9UPU3 1222 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 SQORQ9Y6N5 450 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 MYH4Q9Y623 1939 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 GHRP10912 638 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 UBA1P22314 1058 aaKnown RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 CCND2P30279 289 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 HSD17B4P51659 736 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 ASPRV1Q53RT3 343 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 METTL7BQ6UX53 244 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 MFSD6Q6ZSS7 791 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 TSHZ1Q6ZSZ6 1077 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 DGLUCYQ7Z3D6 616 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 ADGRF4Q8IZF3 695 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 KREMEN2Q8NCW0 462 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 NECTIN4Q96NY8 510 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 AMNQ9BXJ7 453 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 UBA5Q9GZZ9 404 aa10.08□□□□□ -0.8
SMG1-216ENST00000569122 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SMG1-216ENST00000569122 SPTBN4Q9H254 2564 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 GLP2RO95838 553 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 CHRNA1P02708 482 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 GHRHRQ02643 423 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 DUSP6Q16828 381 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 TPRNQ4KMQ1 711 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 SPOUT1Q5T280 376 aaKnown RBP10.07□□□□□ -0.8
SMG1-216ENST00000569122 IER5Q5VY09 327 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 CES5AQ6NT32 575 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 ADGRD2Q7Z7M1 963 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 TICAM2Q86XR7 235 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 RASGRP4Q8TDF6 673 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 ESR2Q92731 530 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 PUF60Q9UHX1 559 aaKnown RBP10.07□□□□□ -0.8
SMG1-216ENST00000569122 LRFN2Q9ULH4 789 aa10.07□□□□□ -0.8
SMG1-216ENST00000569122 PTPRSQ13332 1948 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 M0QZ92 97 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 RGS20O76081 388 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 FGAP02671 866 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 GOLGA8HP0CJ92 632 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 DNAJB1P25685 340 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 ADAM17P78536 824 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 SP2Q02086 613 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 PUM1Q14671 1186 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMG1-216ENST00000569122 LPIN1Q14693 890 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 PGM5Q15124 567 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 QRICH1Q2TAL8 776 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 GIMAP8Q8ND71 665 aaPredicted RBP10.06□□□□□ -0.8
SMG1-216ENST00000569122 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 KCNG4Q8TDN1 519 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 LMBR1Q8WVP7 490 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
SMG1-216ENST00000569122 MYO15AQ9UKN7 3530 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 GCOM1H8Y6P7 765 aaPredicted RBP10.05□□□□□ -0.8
SMG1-216ENST00000569122 PER2O15055 1255 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 SORBS3O60504 671 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 PPFIA3O75145 1194 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 PDGFBP01127 241 aaPredicted RBP10.05□□□□□ -0.8
SMG1-216ENST00000569122 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
SMG1-216ENST00000569122 POLR2MP0CAP2 368 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 TECP42680 631 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 ITIH3Q06033 890 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 MGAT3Q09327 533 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 BMS1Q14692 1282 aaKnown RBP10.05□□□□□ -0.8
SMG1-216ENST00000569122 FBXO47Q5MNV8 452 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 ODR4Q5SWX8 454 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
SMG1-216ENST00000569122 MIER1Q8N108 512 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms