RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ZNF215Q9UL58 517 aaPredicted RBP14.47□□□□□ -0.09
SNX29-207ENST00000568949 PCDHA1Q9Y5I3 950 aa14.47□□□□□ -0.09
SNX29-207ENST00000568949 TMEM221A6NGB7 291 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 B4E1Z4 1266 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 M0R296 226 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 STAM2O75886 525 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 CHRNA1P02708 482 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 HOXA13P31271 388 aaPredicted RBP14.46□□□□□ -0.09
SNX29-207ENST00000568949 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
SNX29-207ENST00000568949 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 P2RX5Q93086 422 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 PBXIP1Q96AQ6 731 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 PHOX2BQ99453 314 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 GPR20Q99678 358 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 IGFLR1Q9H665 355 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 ZSWIM5Q9P217 1185 aa14.46□□□□□ -0.09
SNX29-207ENST00000568949 NRCAMQ92823 1304 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 SPATA31C2B4DYI2 1134 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 KLRF2D3W0D1 207 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 ENPP3O14638 875 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 LINC01565O15544 149 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 NDUFV1P49821 464 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 ARHGAP4P98171 946 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 BTG3Q14201 252 aaPredicted RBP14.45□□□□□ -0.1
SNX29-207ENST00000568949 NAALADL2Q58DX5 795 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 IER5LQ5T953 404 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 TAF2Q6P1X5 1199 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
SNX29-207ENST00000568949 LMBR1Q8WVP7 490 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
SNX29-207ENST00000568949 INPP4AQ96PE3 977 aaPredicted RBP14.45□□□□□ -0.1
SNX29-207ENST00000568949 PLAGL2Q9UPG8 496 aa14.45□□□□□ -0.1
SNX29-207ENST00000568949 FRMPD4Q14CM0 1322 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 LOC730098B7Z3J9 87 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 FIBPO43427 364 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 DGKIO75912 1065 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 GHRP10912 638 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 ZXDAP98168 799 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 MGAT3Q09327 533 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 COASYQ13057 564 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 CAMK1Q14012 370 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 CBX2Q14781 532 aaPredicted RBP14.44□□□□□ -0.1
SNX29-207ENST00000568949 CYFIP1Q7L576 1253 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 FCHSD1Q86WN1 690 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 EFHBQ8N7U6 833 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 KRT23Q9C075 422 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 ALG13Q9NP73 1137 aaKnown RBP14.44□□□□□ -0.1
SNX29-207ENST00000568949 WDFY4Q6ZS81 3184 aa14.44□□□□□ -0.1
SNX29-207ENST00000568949 BAZ2BQ9UIF8 2168 aaKnown RBP14.43□□□□□ -0.1
SNX29-207ENST00000568949 PALM3A6NDB9 673 aaPredicted RBP14.43□□□□□ -0.1
SNX29-207ENST00000568949 SDSP20132 328 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 MRPS9P82933 396 aaKnown RBP14.43□□□□□ -0.1
SNX29-207ENST00000568949 TCF15Q12870 199 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 LPIN1Q14693 890 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 IFIT1BQ5T764 474 aaKnown RBP14.43□□□□□ -0.1
SNX29-207ENST00000568949 RSPH3Q86UC2 560 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
SNX29-207ENST00000568949 FBXL6Q8N531 539 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 SMRP1Q8NCR6 262 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 SENP7Q9BQF6 1050 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 CNNM2Q9H8M5 875 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 CLEC1BQ9P126 229 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 MAD2L2Q9UI95 211 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 DOCK5Q9H7D0 1870 aa14.43□□□□□ -0.1
SNX29-207ENST00000568949 KMT2EQ8IZD2 1858 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
SNX29-207ENST00000568949 IMMTQ16891 758 aaKnown RBP14.42□□□□□ -0.1
SNX29-207ENST00000568949 UTP14CQ5TAP6 766 aaKnown RBP14.42□□□□□ -0.1
SNX29-207ENST00000568949 TSHZ1Q6ZSZ6 1077 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 SPPL3Q8TCT6 385 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 IRF2BPLQ9H1B7 796 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 RIOX1Q9H6W3 641 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 PTPRZ1P23471 2315 aaPredicted RBP14.42□□□□□ -0.1
SNX29-207ENST00000568949 TRIOO75962 3097 aa14.42□□□□□ -0.1
SNX29-207ENST00000568949 RPLP2P05387 115 aaKnown RBP14.41□□□□□ -0.1
SNX29-207ENST00000568949 ITGB1P05556 798 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 DNAJB1P25685 340 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 SIGLEC14Q08ET2 396 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 SEC23AQ15436 765 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 FBXO47Q5MNV8 452 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 XRRA1Q6P2D8 792 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 ADGRD2Q7Z7M1 963 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 CRIPAKQ8N1N5 446 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 GIMAP8Q8ND71 665 aaPredicted RBP14.41□□□□□ -0.1
SNX29-207ENST00000568949 DSCC1Q9BVC3 393 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 PHF7Q9BWX1 381 aaPredicted RBP14.41□□□□□ -0.1
SNX29-207ENST00000568949 MRPL42Q9Y6G3 142 aaKnown RBP14.41□□□□□ -0.1
SNX29-207ENST00000568949 SQORQ9Y6N5 450 aa14.41□□□□□ -0.1
SNX29-207ENST00000568949 C5orf42Q9H799 3197 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 PNMA6FA0A0J9YX94 578 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
SNX29-207ENST00000568949 GFRA3O60609 400 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 CSPG5O95196 566 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms