RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 FIBCD1Q8N539 461 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
USB1-214ENST00000568848 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
USB1-214ENST00000568848 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 ATP9AO75110 1047 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 ALADP13716 330 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
USB1-214ENST00000568848 ADAM17P78536 824 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 CAMK1Q14012 370 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 KRT23Q9C075 422 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
USB1-214ENST00000568848 MBTPS2O43462 519 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 IGBP1P78318 339 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 PTH1RQ03431 593 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 MGAT3Q09327 533 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 TMEM62Q0P6H9 643 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 PAN2Q504Q3 1202 aaKnown RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 METTL7BQ6UX53 244 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 SMC5Q8IY18 1101 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 INPP4AQ96PE3 977 aaPredicted RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
USB1-214ENST00000568848 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 ADGRA3Q8IWK6 1321 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
USB1-214ENST00000568848 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 IFIT3O14879 490 aaKnown RBP17.17■□□□□ 0.34
USB1-214ENST00000568848 BMPR1AP36894 532 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 CTC1Q2NKJ3 1217 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 DNAJB3Q8WWF6 145 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 MAF1Q9H063 256 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 MRPL42Q9Y6G3 142 aaKnown RBP17.17■□□□□ 0.34
USB1-214ENST00000568848 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
USB1-214ENST00000568848 USP34Q70CQ2 3546 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 ENPP3O14638 875 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 CYP21A2P08686 494 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 TGFB3P10600 412 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 CD52P31358 61 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 ICAM3P32942 547 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
USB1-214ENST00000568848 NUCB1Q02818 461 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 IER5LQ5T953 404 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 RTN4RL1Q86UN2 441 aaPredicted RBP17.16■□□□□ 0.34
USB1-214ENST00000568848 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 FAM49AQ9H0Q0 323 aaPredicted RBP17.16■□□□□ 0.34
USB1-214ENST00000568848 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 HCSTQ9UBK5 93 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 ZDBF2Q9HCK1 2354 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 TTC3P53804 2025 aa17.16■□□□□ 0.34
USB1-214ENST00000568848 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 FIBPO43427 364 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 GSPT1P15170 499 aaKnown RBP17.15■□□□□ 0.34
USB1-214ENST00000568848 RXRAP19793 462 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 PDE4AP27815 886 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 ANTXR2P58335 489 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
USB1-214ENST00000568848 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
USB1-214ENST00000568848 UBE2SQ16763 222 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
USB1-214ENST00000568848 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 MARCH8Q5T0T0 291 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 RBM23Q86U06 439 aaKnown RBP17.15■□□□□ 0.34
USB1-214ENST00000568848 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 CDY2AQ9Y6F7 541 aa17.15■□□□□ 0.34
USB1-214ENST00000568848 PLXNA4Q9HCM2 1894 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 TROAPQ12815 778 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 NEDD9Q14511 834 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 GRIK4Q16099 956 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 FBXO47Q5MNV8 452 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
USB1-214ENST00000568848 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
USB1-214ENST00000568848 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 STXBP3O00186 592 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 MEIS2O14770 477 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 ITGB1P05556 798 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 KCNA2P16389 499 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 APBB2Q92870 758 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms