RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 IDI2Q9BXS1 227 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 CCDC86Q9H6F5 360 aaKnown RBP6.98□□□□□ -1.29
CDH13-211ENST00000568770 XIRP2A4UGR9 3374 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 C1QTNF9BB2RNN3 333 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 F8W735 103 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 PEX10O60683 326 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 CYP11A1P05108 521 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 GSTP1P09211 210 aaKnown RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 CYP2B6P20813 491 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 HMGCS2P54868 508 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 PTPN11Q06124 597 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 PICALMQ13492 652 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 ACAD11Q709F0 780 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 ERMP1Q7Z2K6 904 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 LPIN2Q92539 896 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 CDX2Q99626 313 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 LBHD1Q9BQE6 289 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 ASCC2Q9H1I8 757 aaPredicted RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 DDX4Q9NQI0 724 aaKnown RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 IGSF5Q9NSI5 407 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 MYO5AQ9Y4I1 1855 aaKnown RBP6.97□□□□□ -1.29
CDH13-211ENST00000568770 PCDHB5Q9Y5E4 795 aa6.97□□□□□ -1.29
CDH13-211ENST00000568770 ZNFX1Q9P2E3 1918 aaKnown RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 EYA2O00167 538 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 ZNF862O60290 1169 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 ZKSCAN1P17029 563 aaPredicted RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 LIG1P18858 919 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 NOS3P29474 1203 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 CCND3P30281 292 aaPredicted RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 LIG3P49916 1009 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 PABPC4Q13310 644 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDH13-211ENST00000568770 AP3B2Q13367 1082 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 CCDC184Q52MB2 194 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 ATG9AQ7Z3C6 839 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 WDR63Q8IWG1 891 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 MAFAQ8NHW3 353 aaPredicted RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDH13-211ENST00000568770 CBX8Q9HC52 389 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 GNL3LQ9NVN8 582 aaKnown RBP6.96□□□□□ -1.3
CDH13-211ENST00000568770 KBTBD4Q9NVX7 518 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 MORF4L1Q9UBU8 362 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 GGT7Q9UJ14 662 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 GAKO14976 1311 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 SALL1Q9NSC2 1324 aa6.96□□□□□ -1.3
CDH13-211ENST00000568770 MYH1P12882 1939 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 NCOR1O75376 2440 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 MINDY4BA8MYZ0 360 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 C9orf172C9J069 976 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 RNF225M0QZC1 329 aaPredicted RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 TFE3P19532 575 aaPredicted RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 ZNF76P36508 570 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 BTDP43251 543 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 PHKA1P46020 1223 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 RFX5P48382 616 aaPredicted RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 CCL14Q16627 93 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 ATP2B3Q16720 1220 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 AGMOQ6ZNB7 445 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 DZIP1Q86YF9 867 aaKnown RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 PHC3Q8NDX5 983 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 GPRC5AQ8NFJ5 357 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 WFDC12Q8WWY7 111 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 SOCS4Q8WXH5 440 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 KCNB2Q92953 911 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 CORO1BQ9BR76 489 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 RSRP1Q9BUV0 290 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 OSBPL5Q9H0X9 879 aaPredicted RBP6.95□□□□□ -1.3
CDH13-211ENST00000568770 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 SEMA6BQ9H3T3 888 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 TXNRD2Q9NNW7 524 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 TRANK1O15050 2925 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 MYO9BQ13459 2157 aa6.95□□□□□ -1.3
CDH13-211ENST00000568770 SMCHD1A6NHR9 2005 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 PLXNA1Q9UIW2 1896 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 GDF11O95390 407 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 CAP2P40123 477 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 IRX3P78415 501 aaPredicted RBP6.94□□□□□ -1.3
CDH13-211ENST00000568770 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
CDH13-211ENST00000568770 SHHQ15465 462 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 ZNF394Q53GI3 561 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 ALYREFQ86V81 257 aaKnown RBP6.94□□□□□ -1.3
CDH13-211ENST00000568770 ZGPATQ8N5A5 531 aaKnown RBP6.94□□□□□ -1.3
CDH13-211ENST00000568770 GPBAR1Q8TDU6 330 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 USP6NLQ92738 828 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 RNF34Q969K3 372 aa6.94□□□□□ -1.3
CDH13-211ENST00000568770 P2RX7Q99572 595 aaKnown RBP6.94□□□□□ -1.3
CDH13-211ENST00000568770 RUSC1Q9BVN2 902 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms