RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 LRIG3Q6UXM1 1119 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 NELFCDQ8IXH7 590 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 LINC00116Q8NCU8 138 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 GEMIN8Q9NWZ8 242 aaKnown RBP23.66■■□□□ 1.38
DENND4A-208ENST00000568515 ZNF335Q9H4Z2 1342 aaPredicted RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 GOLGA6L10A6NI86 522 aa23.65■■□□□ 1.38
DENND4A-208ENST00000568515 SRRM3A6NNA2 597 aaPredicted RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 BTNL10A8MVZ5 291 aa23.65■■□□□ 1.38
DENND4A-208ENST00000568515 GANQ9H2C0 597 aa23.65■■□□□ 1.38
DENND4A-208ENST00000568515 BMP2KQ9NSY1 1161 aaPredicted RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 FAM107AO95990 144 aa23.65■■□□□ 1.38
DENND4A-208ENST00000568515 HDLBPQ00341 1268 aaKnown RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 SMIM5Q71RC9 77 aa23.65■■□□□ 1.38
DENND4A-208ENST00000568515 NBPF5PQ86XG9 351 aaPredicted RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 RTFDC1Q9BY42 306 aaPredicted RBP23.65■■□□□ 1.38
DENND4A-208ENST00000568515 FRMPD2Q68DX3 1309 aaPredicted RBP23.64■■□□□ 1.38
DENND4A-208ENST00000568515 SSBP05455 408 aaKnown RBP eCLIP23.64■■□□□ 1.38
DENND4A-208ENST00000568515 HSD17B3P37058 310 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 TNNI2P48788 182 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 SCFD2Q8WU76 684 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 CABS1Q96KC9 395 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 NCAPGQ9BPX3 1015 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 GGA2Q9UJY4 613 aa23.64■■□□□ 1.38
DENND4A-208ENST00000568515 KIF4AO95239 1232 aa23.64■■□□□ 1.37
DENND4A-208ENST00000568515 ECHS1P30084 290 aa23.64■■□□□ 1.37
DENND4A-208ENST00000568515 CUL1Q13616 776 aa23.64■■□□□ 1.37
DENND4A-208ENST00000568515 PBKQ96KB5 322 aa23.64■■□□□ 1.37
DENND4A-208ENST00000568515 PCDHA2Q9Y5H9 948 aa23.64■■□□□ 1.37
DENND4A-208ENST00000568515 USP11P51784 963 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 C10orf76Q5T2E6 689 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 ARFGAP2Q8N6H7 521 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 HAS1Q92839 578 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 SETDB2Q96T68 719 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 E7EVH7 732 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 PDHBP11177 359 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 TM4SF1P30408 202 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 HPDP32754 393 aaPredicted RBP23.63■■□□□ 1.37
DENND4A-208ENST00000568515 EPS15P42566 896 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 RNF187Q5TA31 235 aaPredicted RBP23.63■■□□□ 1.37
DENND4A-208ENST00000568515 CCDC65Q8IXS2 484 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 CENPHQ9H3R5 247 aa23.63■■□□□ 1.37
DENND4A-208ENST00000568515 H0YGN5 161 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 GCOM1H8Y6P7 765 aaPredicted RBP23.62■■□□□ 1.37
DENND4A-208ENST00000568515 MYZAPP0CAP1 466 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 BTDP43251 543 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 NOVP48745 357 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 CCDC91Q7Z6B0 441 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 KCTD10Q9H3F6 313 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 ANKIB1Q9P2G1 1089 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 DDX25Q9UHL0 483 aaKnown RBP23.62■■□□□ 1.37
DENND4A-208ENST00000568515 NFS1Q9Y697 457 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 MYH4Q9Y623 1939 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
DENND4A-208ENST00000568515 DDX60LQ5H9U9 1706 aaKnown RBP23.62■■□□□ 1.37
DENND4A-208ENST00000568515 CEP104O60308 925 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 PTK2Q05397 1052 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 ACTRT1Q8TDG2 376 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 GJA10Q969M2 543 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 LRRC45Q96CN5 670 aa23.62■■□□□ 1.37
DENND4A-208ENST00000568515 KCNQ2O43526 872 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 KCNH2Q12809 1159 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 ADAM9Q13443 819 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 UAP1Q16222 522 aaPredicted RBP23.61■■□□□ 1.37
DENND4A-208ENST00000568515 TEX11Q8IYF3 940 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 SCFD1Q8WVM8 642 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 ATAD5Q96QE3 1844 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 MARCH6O60337 910 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 IRF2BP2Q7Z5L9 587 aa23.61■■□□□ 1.37
DENND4A-208ENST00000568515 PPANQ9NQ55 473 aaKnown RBP23.61■■□□□ 1.37
DENND4A-208ENST00000568515 KCNQ4P56696 695 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 IFT88Q13099 833 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 UBE2SQ16763 222 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 HERC4Q5GLZ8 1057 aaPredicted RBP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 HYIQ5T013 277 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 ZNF571Q7Z3V5 609 aaPredicted RBP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 DDX42Q86XP3 938 aaKnown RBP eCLIP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 ZC3H3Q8IXZ2 948 aaKnown RBP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 OR2W6PQ8NHA6 318 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 NT5C3AQ9H0P0 336 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 GOLPH3Q9H4A6 298 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 EMILIN3Q9NT22 766 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 PCDHA12Q9UN75 941 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 E9PMD0 336 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 RGL2O15211 777 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 IFI16Q16666 785 aaKnown RBP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 C6orf89Q6UWU4 347 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 LRRC57Q8N9N7 239 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 CALR3Q96L12 384 aaKnown RBP23.6■■□□□ 1.37
DENND4A-208ENST00000568515 SPATA31A1Q5TZJ5 1347 aa23.6■■□□□ 1.37
DENND4A-208ENST00000568515 NPHP3-ACAD11A0A0J9YXS1 232 aa23.59■■□□□ 1.37
DENND4A-208ENST00000568515 BHMG1C9JSJ3 638 aaPredicted RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 SART1O43290 800 aaKnown RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 ACTN1P12814 892 aa23.59■■□□□ 1.37
DENND4A-208ENST00000568515 SETQ01105 290 aaPredicted RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 ACTN3Q08043 901 aaPredicted RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 SLC51AQ86UW1 340 aa23.59■■□□□ 1.37
DENND4A-208ENST00000568515 MYCBPQ99417 103 aaPredicted RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 AP1M1Q9BXS5 423 aa23.59■■□□□ 1.37
DENND4A-208ENST00000568515 CTNNA1P35221 906 aaKnown RBP23.59■■□□□ 1.37
DENND4A-208ENST00000568515 CACNB1Q02641 598 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms