RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 C19orf81C9J6K1 198 aa9□□□□□ -0.97
SMG1-214ENST00000568038 F5H6K3 240 aa9□□□□□ -0.97
SMG1-214ENST00000568038 ZBTB43O43298 467 aa9□□□□□ -0.97
SMG1-214ENST00000568038 MMP20O60882 483 aa9□□□□□ -0.97
SMG1-214ENST00000568038 LARGE1O95461 756 aa9□□□□□ -0.97
SMG1-214ENST00000568038 NDUFB10O96000 172 aa9□□□□□ -0.97
SMG1-214ENST00000568038 PDIA3P30101 505 aaKnown RBP9□□□□□ -0.97
SMG1-214ENST00000568038 USP14P54578 494 aa9□□□□□ -0.97
SMG1-214ENST00000568038 HMGCS2P54868 508 aa9□□□□□ -0.97
SMG1-214ENST00000568038 BACE1P56817 501 aa9□□□□□ -0.97
SMG1-214ENST00000568038 CCT2P78371 535 aaKnown RBP9□□□□□ -0.97
SMG1-214ENST00000568038 KLRC3Q07444 240 aa9□□□□□ -0.97
SMG1-214ENST00000568038 PPIL2Q13356 520 aa9□□□□□ -0.97
SMG1-214ENST00000568038 RSPO4Q2I0M5 234 aaPredicted RBP9□□□□□ -0.97
SMG1-214ENST00000568038 CCDC96Q2M329 555 aa9□□□□□ -0.97
SMG1-214ENST00000568038 FAM26DQ5JW98 314 aa9□□□□□ -0.97
SMG1-214ENST00000568038 KIAA1755Q5JYT7 1200 aa9□□□□□ -0.97
SMG1-214ENST00000568038 SLFN13Q68D06 897 aa9□□□□□ -0.97
SMG1-214ENST00000568038 GADL1Q6ZQY3 521 aa9□□□□□ -0.97
SMG1-214ENST00000568038 FMR1NBQ8N0W7 255 aaPredicted RBP9□□□□□ -0.97
SMG1-214ENST00000568038 NECAB1Q8N987 351 aa9□□□□□ -0.97
SMG1-214ENST00000568038 NSUN5Q96P11 429 aaKnown RBP9□□□□□ -0.97
SMG1-214ENST00000568038 NUP88Q99567 741 aaPredicted RBP9□□□□□ -0.97
SMG1-214ENST00000568038 KIAA1683Q9H0B3 1180 aa9□□□□□ -0.97
SMG1-214ENST00000568038 SLKQ9H2G2 1235 aaPredicted RBP9□□□□□ -0.97
SMG1-214ENST00000568038 VCPKMTQ9H867 229 aa9□□□□□ -0.97
SMG1-214ENST00000568038 TMOD4Q9NZQ9 345 aa9□□□□□ -0.97
SMG1-214ENST00000568038 FRRS1LQ9P0K9 344 aa9□□□□□ -0.97
SMG1-214ENST00000568038 FRMPD2Q68DX3 1309 aaPredicted RBP9□□□□□ -0.97
SMG1-214ENST00000568038 CXCL11O14625 94 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 DDAH1O94760 285 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 GOLGA8HP0CJ92 632 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 CALM1P0DP23 149 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 CALM2P0DP24 149 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 CALM3P0DP25 149 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 PDHBP11177 359 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 ITGB7P26010 798 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 SLC1A4P43007 532 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 MCM2P49736 904 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 METAP2P50579 478 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG1-214ENST00000568038 NRLP54845 237 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 EVCP57679 992 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 HTRA3P83110 453 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 TROAPQ12815 778 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 MBTPS1Q14703 1052 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 ME3Q16798 604 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 FAM83BQ5T0W9 1011 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 KCTD1Q719H9 257 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 HSCBQ8IWL3 235 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 FANCBQ8NB91 859 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 GMCL1P1Q8NEA9 526 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 CTCFLQ8NI51 663 aaPredicted RBP8.99□□□□□ -0.97
SMG1-214ENST00000568038 SNX21Q969T3 373 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 PBXIP1Q96AQ6 731 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 ZNF274Q96GC6 653 aaPredicted RBP8.99□□□□□ -0.97
SMG1-214ENST00000568038 ZSCAN31Q96LW9 406 aaPredicted RBP8.99□□□□□ -0.97
SMG1-214ENST00000568038 NCOA5Q9HCD5 579 aaKnown RBP8.99□□□□□ -0.97
SMG1-214ENST00000568038 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
SMG1-214ENST00000568038 PHIPQ8WWQ0 1821 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 A0A0G2JLL6 359 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 DTNBO60941 627 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 GHRHP01286 108 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 PARP1P09874 1014 aaKnown RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 ZBTB48P10074 688 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 BMP3P12645 472 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 CDC27P30260 824 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 ANP32AP39687 249 aaKnown RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 GTF2A2P52657 109 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 NRG1Q02297 640 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 IKQ13123 557 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 ADGRE1Q14246 886 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 GRM4Q14833 912 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 DEFB115Q30KQ5 88 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 TTBK2Q6IQ55 1244 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 CYP4F22Q6NT55 531 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 PRRT2Q7Z6L0 340 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 CCDC83Q8IWF9 413 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 DCAF4Q8WV16 495 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 LPAR1Q92633 364 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 LENG1Q96BZ8 264 aaPredicted RBP8.98□□□□□ -0.97
SMG1-214ENST00000568038 TMX3Q96JJ7 454 aa8.98□□□□□ -0.97
SMG1-214ENST00000568038 CCL15-CCL14A0A0B4J2E2 113 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 FAM155AB1AL88 458 aaPredicted RBP8.97□□□□□ -0.97
SMG1-214ENST00000568038 TMEM232C9JQI7 657 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 KLRF2D3W0D1 207 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 TNFRSF10BO14763 440 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CPLX1O14810 134 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 PFKFB2O60825 505 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 SNHG28P0DPA3 235 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CETPP11597 493 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 VCAM1P19320 739 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 KIF5BP33176 963 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 SLC16A2P36021 539 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 C1QTNF8P60827 252 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 SCRN1Q12765 414 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms