RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC17A8Q8NDX2 589 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 PPP1R13LQ8WUF5 828 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 GPRASP2Q96D09 838 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 VWCEQ96DN2 955 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 JAKMIP1Q96N16 626 aaKnown RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 CTAGE1Q96RT6 745 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 CDX2Q99626 313 aaPredicted RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 C16orf70Q9BSU1 422 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 ALG1Q9BT22 464 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 USP26Q9BXU7 913 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 PBX4Q9BYU1 374 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 GLT8D2Q9H1C3 349 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 ZNF576Q9H609 170 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 TUT1Q9H6E5 874 aaKnown RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 RIC8AQ9NPQ8 531 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 RTEL1Q9NZ71 1219 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 CXXC1Q9P0U4 656 aaPredicted RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 HDAC6Q9UBN7 1215 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 MSRAQ9UJ68 235 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 SNX14Q9Y5W7 946 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 SLC4A7Q9Y6M7 1214 aa5.49□□□□□ -1.53
CLK3-219ENST00000567805 MYH9P35579 1960 aaKnown RBP5.49□□□□□ -1.53
CLK3-219ENST00000567805 LOXHD1Q8IVV2 1947 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 ZBBXA8MT70 800 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 GRXCR1A8MXD5 290 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 MAFGO15525 162 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 BAIAP3O94812 1187 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 FOSP01100 380 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 LGALS2P05162 132 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 SMIM10L2AP0DMW4 78 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 SMIM10L2BP0DMW5 78 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 CHRM1P11229 460 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 CKBP12277 381 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 CPA1P15085 419 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 FOSL2P15408 326 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 SELPP16109 830 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 KCNA2P16389 499 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 ATP2A2P16615 1042 aaKnown RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 RPS6KB1P23443 525 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 CDC27P30260 824 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 HOXC8P31273 242 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 ADD1P35611 737 aaKnown RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 PBX2P40425 430 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 ADCY7P51828 1080 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 APOBRQ0VD83 1088 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 MTMR1Q13613 665 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 PFKFB3Q16875 520 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 ERICH6BQ5W0A0 696 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 TYW1BQ6NUM6 668 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 Q6ZUG5 572 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 PHOSPHO2Q8TCD6 241 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 MYLIPQ8WY64 445 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 DHX38Q92620 1227 aaKnown RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 BRF1Q92994 677 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 SLC9A7Q96T83 725 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 GPR20Q99678 358 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 AGXT2Q9BYV1 514 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 FTOQ9C0B1 505 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLK3-219ENST00000567805 BCAS3Q9H6U6 928 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 JADE2Q9NQC1 790 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 FAM217BQ9NTX9 383 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 BARHL2Q9NY43 387 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 ZNF215Q9UL58 517 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 NAP1L2Q9ULW6 460 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 PCDHA6Q9UN73 950 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 BOLA1Q9Y3E2 137 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 PCDHA8Q9Y5H6 950 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 PCDHA11Q9Y5I1 949 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 UBIAD1Q9Y5Z9 338 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 V9GY48 417 aaPredicted RBP5.48□□□□□ -1.53
CLK3-219ENST00000567805 MUC3AQ02505 3323 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 EMSYQ7Z589 1322 aa5.48□□□□□ -1.53
CLK3-219ENST00000567805 NLRC5Q86WI3 1866 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 COL4A4P53420 1690 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 ESYT2A0FGR8 921 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 C17orf102A2RUQ5 167 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 SMCO2A6NFE2 343 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 PRPF3O43395 683 aaKnown RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 EFCAB14O75071 495 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ATP9AO75110 1047 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 CAND2O75155 1236 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 CXCL10P02778 98 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 GNAT1P11488 350 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 SCG2P13521 617 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ITGB5P18084 799 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 TCF7P36402 384 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 CLK2P49760 499 aaKnown RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 EVCP57679 992 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ZNF200P98182 395 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 SP4Q02446 784 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 AP3B2Q13367 1082 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 HIC1Q14526 733 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 GPNMBQ14956 572 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 GRIN2CQ14957 1233 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 TRIM71Q2Q1W2 868 aaKnown RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 CEP55Q53EZ4 464 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ZNF618Q5T7W0 954 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 MCTP2Q6DN12 878 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 CNKSR3Q6P9H4 555 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms