RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 CHMP2AO43633 222 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 SLC37A4O43826 429 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 MCM7P33993 719 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 BECN1Q14457 450 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 FAM160B1Q5W0V3 765 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-219ENST00000567399 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 LENG9Q96B70 501 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 RIT2Q99578 217 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 TMEM39AQ9NV64 488 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-219ENST00000567399 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
COMMD4-219ENST00000567399 KIF28PB7ZC32 967 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 F2P00734 622 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 PSAPP07602 524 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 CLTBP09497 229 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 SUPT20HL2P0C7V6 817 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-219ENST00000567399 SYN1P17600 705 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
COMMD4-219ENST00000567399 MARK3P27448 753 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 CDK7P50613 346 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-219ENST00000567399 ZNF174Q15697 407 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 CALCRLQ16602 461 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 ANKRD33Q7Z3H0 272 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-219ENST00000567399 SLFN12Q8IYM2 578 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 KAT2BQ92831 832 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
COMMD4-219ENST00000567399 GJA10Q969M2 543 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 ERAP1Q9NZ08 941 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 GRIN2DO15399 1336 aa17.12■□□□□ 0.33
COMMD4-219ENST00000567399 TBX3O15119 743 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
COMMD4-219ENST00000567399 NEMFO60524 1076 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 SFNP31947 248 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 STAT5BP51692 787 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 MIER3Q7Z3K6 550 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 TRIM50Q86XT4 487 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 SLC43A3Q8NBI5 491 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-219ENST00000567399 ZNF302Q9NR11 478 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 PCDHA10Q9Y5I2 948 aa17.11■□□□□ 0.33
COMMD4-219ENST00000567399 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 CCNE2O96020 404 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 GNAT1P11488 350 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 JAK3P52333 1124 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 DISC1Q9NRI5 854 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
COMMD4-219ENST00000567399 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 H0YGN5 161 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 HAS3O00219 553 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 B4GALT4O60513 344 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 PSMD10O75832 226 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 ATG7O95352 703 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 RAG1P15918 1043 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 SYT1P21579 422 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 TXKP42681 527 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 FAAP100Q0VG06 881 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 PTGISQ16647 500 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 ABHD15Q6UXT9 468 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 TRMT1LQ7Z2T5 733 aaKnown RBP17.09■□□□□ 0.33
COMMD4-219ENST00000567399 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
COMMD4-219ENST00000567399 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 DOCK5Q9H7D0 1870 aa17.09■□□□□ 0.33
COMMD4-219ENST00000567399 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 LGR5O75473 907 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-219ENST00000567399 RILPL1Q5EBL4 403 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 PLPPR4Q7Z2D5 763 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 RNPEPQ9H4A4 650 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 GABBR1Q9UBS5 961 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
COMMD4-219ENST00000567399 STX6O43752 255 aa17.07■□□□□ 0.32
COMMD4-219ENST00000567399 SLC26A2P50443 739 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms