RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 RPS6KA1Q15418 735 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 SNCBQ16143 134 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 QPCTQ16769 361 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 KIAA0753Q2KHM9 967 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 CYB5D1Q6P9G0 228 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 RAD54LQ92698 747 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 SEC16BQ96JE7 1060 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 TANGO6Q9C0B7 1094 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 LRRC27Q9C0I9 530 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
COMMD4-215ENST00000566843 KIF4AO95239 1232 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 ELF1P32519 619 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 POLR2FP61218 127 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 FKBP3Q00688 224 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 C10orf76Q5T2E6 689 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 DYMQ7RTS9 669 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 SGSM3Q96HU1 749 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 PACSIN1Q9BY11 444 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 SUFUQ9UMX1 484 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 CLGNO14967 610 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 GNA11P29992 359 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 NAPAP54920 295 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 RNASE9P60153 205 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 SPRED3Q2MJR0 410 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 OR2W6PQ8NHA6 318 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 RAPGEF5Q92565 580 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 TATDN2Q93075 761 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 NEUROG2Q9H2A3 272 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 MCM9Q9NXL9 1143 aa17.19■□□□□ 0.34
COMMD4-215ENST00000566843 CNOT8Q9UFF9 292 aaKnown RBP17.19■□□□□ 0.34
COMMD4-215ENST00000566843 SMCO2A6NFE2 343 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 USP17L8P0C7I0 530 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 GHRP10912 638 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 CTNNA1P35221 906 aaKnown RBP17.18■□□□□ 0.34
COMMD4-215ENST00000566843 XRCC4Q13426 336 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 TMEM119Q4V9L6 283 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 KCNK3O14649 394 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 GNA14O95837 355 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 CACNA2D3Q8IZS8 1091 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 LRRC57Q8N9N7 239 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 TBCKQ8TEA7 893 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 GANQ9H2C0 597 aa17.18■□□□□ 0.34
COMMD4-215ENST00000566843 CCDC188H7C350 402 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 DNAJC8O75937 253 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 TMOD1P28289 359 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 TXKP42681 527 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 SCTRP47872 440 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 IFFO1Q0D2I5 559 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 KLHL30Q0D2K2 578 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 PDIA5Q14554 519 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 LRRC41Q15345 812 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 ASIC2Q16515 512 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 GLIS3Q8NEA6 775 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 SEC14L1Q92503 715 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 DDX12PQ92771 950 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 KDM4CQ9H3R0 1056 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 CENPHQ9H3R5 247 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 KLRF2D3W0D1 207 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 SEPT2Q15019 361 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 CCDC87Q9NVE4 849 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 ODF2LQ9ULJ1 636 aa17.17■□□□□ 0.34
COMMD4-215ENST00000566843 TPX2Q9ULW0 747 aaKnown RBP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD4-215ENST00000566843 ESYT2A0FGR8 921 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 SART1O43290 800 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 DRD4P21917 467 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 NF2P35240 595 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 CRKLP46109 303 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 RAPGEF1Q13905 1077 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 IFI16Q16666 785 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 RASGEF1CQ8N431 466 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 CCT6BQ92526 530 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 CENPTQ96BT3 561 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 DNAJC19Q96DA6 116 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms