RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
CDH13-208ENST00000566333 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 GIMAP8Q8ND71 665 aaPredicted RBP9.23□□□□□ -0.93
CDH13-208ENST00000566333 KAT2BQ92831 832 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 FAM20AQ96MK3 541 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 PCYT2Q99447 389 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 SDF4Q9BRK5 362 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 AP5M1Q9H0R1 490 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 UNC45AQ9H3U1 944 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 TBC1D22BQ9NU19 505 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 PHF24Q9UPV7 400 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 CLIC4Q9Y696 253 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 EMSYQ7Z589 1322 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 IGSF9BQ9UPX0 1349 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 MYH11P35749 1972 aa9.23□□□□□ -0.93
CDH13-208ENST00000566333 IGKV6D-21A0A0A0MT36 114 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 POTEMA6NI47 508 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 EML1O00423 815 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 GAS7O60861 476 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 LGR5O75473 907 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 ATG7O95352 703 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 LGALS2P05162 132 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 ASGR1P07306 291 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 TCF7P36402 384 aaPredicted RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 NASPP49321 788 aaPredicted RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 ACLYP53396 1101 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 KRT76Q01546 638 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 SF3A1Q15459 793 aaKnown RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 KCNA10Q16322 511 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 UGCGQ16739 394 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 GNASQ5JWF2 1037 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 ABHD15Q6UXT9 468 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 RNF180Q86T96 592 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 SLFN12Q8IYM2 578 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 IPO9Q96P70 1041 aaKnown RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 C16orf70Q9BSU1 422 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 TSEN34Q9BSV6 310 aaKnown RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 TEKT3Q9BXF9 490 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 MORC2Q9Y6X9 1032 aaPredicted RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 RANBP2P49792 3224 aaKnown RBP9.22□□□□□ -0.93
CDH13-208ENST00000566333 GRIN2DO15399 1336 aa9.22□□□□□ -0.93
CDH13-208ENST00000566333 SCN5AQ14524 2016 aa9.21□□□□□ -0.93
CDH13-208ENST00000566333 CCDC85CA6NKD9 419 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 WDR64B1ANS9 1081 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 KBTBD13C9JR72 458 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 HAS3O00219 553 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 LAD1O00515 517 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 NOP56O00567 594 aaKnown RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 CHMP2AO43633 222 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 TFRCP02786 760 aaKnown RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 SUPT20HL2P0C7V6 817 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 PRPHP41219 470 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDH13-208ENST00000566333 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 GRIN1Q05586 938 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 SNX17Q15036 470 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 DGKDQ16760 1214 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 CXCL17Q6UXB2 119 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 SMAP1Q8IYB5 467 aaPredicted RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 PCSK9Q8NBP7 692 aaKnown RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 ARRDC4Q8NCT1 418 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 TTC12Q9H892 705 aaPredicted RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 SPC25Q9HBM1 224 aa9.21□□□□□ -0.94
CDH13-208ENST00000566333 WRAP73Q9P2S5 460 aaPredicted RBP9.21□□□□□ -0.94
CDH13-208ENST00000566333 ZNF862O60290 1169 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 PPFIA4O75335 1185 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 BMP15O95972 392 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 MYL3P08590 195 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 CAPN2P17655 700 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 HOXC8P31273 242 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 SFNP31947 248 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 TXKP42681 527 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 JAK3P52333 1124 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 PSMC6P62333 389 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 NUCB2P80303 420 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 ARL6IP4Q66PJ3 421 aaKnown RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 NCAPH2Q6IBW4 605 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 IGSF22Q8N9C0 903 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 RDM1Q8NG50 284 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 AFAP1L1Q8TED9 768 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 PPP1R13LQ8WUF5 828 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 PAWRQ96IZ0 340 aaKnown RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 MTG1Q9BT17 334 aaPredicted RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 DISC1Q9NRI5 854 aa9.2□□□□□ -0.94
CDH13-208ENST00000566333 FBXO2Q9UK22 296 aaPredicted RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
CDH13-208ENST00000566333 PP2D1A8MPX8 630 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms