RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 DBF4BQ8NFT6 615 aa21■□□□□ 0.95
USB1-213ENST00000566292 LMBR1Q8WVP7 490 aa21■□□□□ 0.95
USB1-213ENST00000566292 ARNTL2Q8WYA1 636 aa21■□□□□ 0.95
USB1-213ENST00000566292 KCNB2Q92953 911 aa21■□□□□ 0.95
USB1-213ENST00000566292 JADE2Q9NQC1 790 aa21■□□□□ 0.95
USB1-213ENST00000566292 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
USB1-213ENST00000566292 GSTTP1A0A1W2PQM5 241 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 EFCAB14O75071 495 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 GJB5O95377 273 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 GNAT1P11488 350 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 POU3F3P20264 500 aaPredicted RBP20.99■□□□□ 0.95
USB1-213ENST00000566292 TJAP1Q5JTD0 557 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 PPP1R18Q6NYC8 613 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.99■□□□□ 0.95
USB1-213ENST00000566292 MICALL1Q8N3F8 863 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 PGBD1Q96JS3 809 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 ZBED2Q9BTP6 218 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 THEGQ9P2T0 379 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 MTCH2Q9Y6C9 303 aa20.99■□□□□ 0.95
USB1-213ENST00000566292 STXBP3O00186 592 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 CAND2O75155 1236 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 CTSHP09668 335 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 ARHGAP4P98171 946 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 PLEKHG4Q58EX7 1191 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 KRT40Q6A162 431 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 SEPT1Q8WYJ6 367 aa20.98■□□□□ 0.95
USB1-213ENST00000566292 MAFGO15525 162 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 HMGB1P09429 215 aaKnown RBP20.97■□□□□ 0.95
USB1-213ENST00000566292 RCAN1P53805 252 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 FAM117BQ6P1L5 589 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 CYP2W1Q8TAV3 490 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 ATXN2LQ8WWM7 1075 aaKnown RBP20.97■□□□□ 0.95
USB1-213ENST00000566292 SYMPKQ92797 1274 aaKnown RBP20.97■□□□□ 0.95
USB1-213ENST00000566292 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 RAD9AQ99638 391 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 MXRA8Q9BRK3 442 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 EHMT1Q9H9B1 1298 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 BARHL2Q9NY43 387 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 SNX14Q9Y5W7 946 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 NRCAMQ92823 1304 aa20.97■□□□□ 0.95
USB1-213ENST00000566292 hCG_1984214I3L0E3 225 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 LPXNO60711 386 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 MARK3P27448 753 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 HSPA4P34932 840 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 ADD1P35611 737 aaKnown RBP20.96■□□□□ 0.95
USB1-213ENST00000566292 ADCY7P51828 1080 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 APOBRQ0VD83 1088 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 ZNF713Q8N859 430 aaPredicted RBP20.96■□□□□ 0.95
USB1-213ENST00000566292 ANO3Q9BYT9 981 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 KCNH7Q9NS40 1196 aa20.96■□□□□ 0.95
USB1-213ENST00000566292 NAP1L2Q9ULW6 460 aaPredicted RBP20.96■□□□□ 0.95
USB1-213ENST00000566292 SMCO2A6NFE2 343 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 GTPBP6O43824 516 aaPredicted RBP20.95■□□□□ 0.94
USB1-213ENST00000566292 CLK2P49760 499 aaKnown RBP20.95■□□□□ 0.94
USB1-213ENST00000566292 GRB10Q13322 594 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 FAM26DQ5JW98 314 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 RUFY4Q6ZNE9 571 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 Q6ZUG5 572 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 TEX2Q8IWB9 1127 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 JAKMIP1Q96N16 626 aaKnown RBP20.95■□□□□ 0.94
USB1-213ENST00000566292 ASB2Q96Q27 587 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 PCYT2Q99447 389 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 TMEM260Q9NX78 707 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 ERAP1Q9NZ08 941 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 LOXHD1Q8IVV2 1947 aa20.95■□□□□ 0.94
USB1-213ENST00000566292 TCF20Q9UGU0 1960 aaKnown RBP20.94■□□□□ 0.94
USB1-213ENST00000566292 LINC01553A4QN01 128 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 FOSP01100 380 aaPredicted RBP20.94■□□□□ 0.94
USB1-213ENST00000566292 ARP10275 920 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 METAP2P50579 478 aaKnown RBP eCLIP20.94■□□□□ 0.94
USB1-213ENST00000566292 PPFIA1Q13136 1202 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 MYOCDQ8IZQ8 938 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 SEPT8Q92599 483 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 GLG1Q92896 1179 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 SMARCAD1Q9H4L7 1026 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 JPH1Q9HDC5 661 aaPredicted RBP20.94■□□□□ 0.94
USB1-213ENST00000566292 SLC9A2Q9UBY0 812 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
USB1-213ENST00000566292 AMHP03971 560 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 SREBF1P36956 1147 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 ERVK-21P61565 698 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 MRPS5P82675 430 aaKnown RBP20.93■□□□□ 0.94
USB1-213ENST00000566292 FGD1P98174 961 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 ITGB3BPQ13352 177 aaPredicted RBP20.93■□□□□ 0.94
USB1-213ENST00000566292 AP3B2Q13367 1082 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 GRIK4Q16099 956 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 PFKFB3Q16875 520 aaPredicted RBP20.93■□□□□ 0.94
USB1-213ENST00000566292 MARCH8Q5T0T0 291 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 RPAINQ86UA6 219 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 BRF1Q92994 677 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 NFASCO94856 1347 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 NID2Q14112 1375 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 XIRP2A4UGR9 3374 aa20.93■□□□□ 0.94
USB1-213ENST00000566292 NCOR1O75376 2440 aa20.92■□□□□ 0.94
USB1-213ENST00000566292 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.92■□□□□ 0.94
USB1-213ENST00000566292 MBLAC1A4D2B0 266 aaPredicted RBP20.92■□□□□ 0.94
USB1-213ENST00000566292 ADAMTS3O15072 1205 aa20.92■□□□□ 0.94
USB1-213ENST00000566292 CHRNA1P02708 482 aa20.92■□□□□ 0.94
USB1-213ENST00000566292 MGAT3Q09327 533 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms