RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 FSTL4Q6MZW2 842 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 NLGN4XQ8N0W4 816 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 ASIC4Q96FT7 647 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 ADAMTS10Q9H324 1103 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 TCF7L1Q9HCS4 588 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 TOPORSQ9NS56 1045 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA6AQ9NYA3 693 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 B3GALT1Q9Y5Z6 326 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA8AA7E2F4 631 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 USP2O75604 605 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 ZGLP1P0C6A0 271 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 RBP3P10745 1247 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 RECQLP46063 649 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 SCAND1P57086 179 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 BNIP3Q12983 259 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 MAP9Q49MG5 647 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 CPZQ66K79 652 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 CEP128Q6ZU80 1094 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 CMIPQ8IY22 773 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 MAGEB6Q8N7X4 407 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 ZNF610Q8N9Z0 462 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 UHMK1Q8TAS1 419 aaKnown RBP6.61□□□□□ -1.35
CNOT1-209ENST00000566240 DLG3Q92796 817 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 ANKRD6Q9Y2G4 727 aa6.61□□□□□ -1.35
CNOT1-209ENST00000566240 CYP17A1P05093 508 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 KRT18P05783 430 aaKnown RBP6.6□□□□□ -1.35
CNOT1-209ENST00000566240 PTX3P26022 381 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-209ENST00000566240 CD96P40200 585 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 KRT85P78386 507 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 LRRC32Q14392 662 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 HLTFQ14527 1009 aaKnown RBP eCLIP6.6□□□□□ -1.35
CNOT1-209ENST00000566240 SLC14A2Q15849 920 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 RALGPS1Q5JS13 557 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 CXorf57Q6NSI4 855 aaKnown RBP6.6□□□□□ -1.35
CNOT1-209ENST00000566240 CPA6Q8N4T0 437 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 ANKS4BQ8N8V4 417 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 LMBR1Q8WVP7 490 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 ZDHHC5Q9C0B5 715 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 MS4A5Q9H3V2 200 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 SP110Q9HB58 689 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 PDLIM7Q9NR12 457 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 SLAMF8Q9P0V8 285 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 IMPACTQ9P2X3 320 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 FBLN5Q9UBX5 448 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 MRFAP1Q9Y605 127 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 ATP23Q9Y6H3 246 aa6.6□□□□□ -1.35
CNOT1-209ENST00000566240 TRIM75PA6NK02 468 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 NTRK1P04629 796 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 U2AF1L5P0DN76 240 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-209ENST00000566240 PF4V1P10720 104 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TACR1P25103 407 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 GPR3P46089 330 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 U2AF1Q01081 240 aaKnown RBP eCLIP6.59□□□□□ -1.35
CNOT1-209ENST00000566240 MVKQ03426 396 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 ZP2Q05996 745 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TCIRG1Q13488 830 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 ODF1Q14990 250 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TMEM132BQ14DG7 1078 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 SEC23AQ15436 765 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 GFOD2Q3B7J2 385 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TMEM240Q5SV17 173 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 STEAP3Q658P3 488 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-209ENST00000566240 GALNT18Q6P9A2 607 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 FRMD7Q6ZUT3 714 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 STK11IPQ8N1F8 1099 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 ALPK1Q96QP1 1244 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 PSMD1Q99460 953 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 KCNH7Q9NS40 1196 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 ACSL6Q9UKU0 697 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 PNMA8BQ9ULN7 279 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-209ENST00000566240 GIT1Q9Y2X7 761 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 NUB1Q9Y5A7 615 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
CNOT1-209ENST00000566240 TPD52L2O43399 206 aaKnown RBP6.58□□□□□ -1.36
CNOT1-209ENST00000566240 PCDHGA12O60330 932 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 MAFKO60675 156 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 TGFB1P01137 390 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 MSL3P1P0C860 447 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 CD40P25942 277 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 PDCD1Q15116 288 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 CHRNA2Q15822 529 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 EMC4Q5J8M3 183 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 CYP4F22Q6NT55 531 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 KCTD1Q719H9 257 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 SPPL2CQ8IUH8 684 aa6.58□□□□□ -1.36
CNOT1-209ENST00000566240 RBM12BQ8IXT5 1001 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms