RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 H3BRB1 525 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 SLC37A4O43826 429 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 CCNT1O60563 726 aaKnown RBP23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 ATG7O95352 703 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 CD4P01730 458 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 CLTBP09497 229 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 PSEN2P49810 448 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 MFSD10Q14728 455 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 TUT1Q9H6E5 874 aaKnown RBP23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 KCNMB3Q9NPA1 279 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 PDLIM7Q9NR12 457 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 TCEAL9Q9UHQ7 104 aa23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 RANBP2P49792 3224 aaKnown RBP23.85■■□□□ 1.41
SHCBP1-205ENST00000566016 TBX3O15119 743 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 TLR3O15455 904 aaKnown RBP23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 LGR5O75473 907 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 CCNE2O96020 404 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 PDCP20941 246 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 KIAA0753Q2KHM9 967 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 SMAP1Q8IYB5 467 aaPredicted RBP23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 FAM20AQ96MK3 541 aa23.84■■□□□ 1.41
SHCBP1-205ENST00000566016 PSMD10O75832 226 aa23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 TRAPPC10P48553 1259 aa23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 FAAP100Q0VG06 881 aa23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 ORC2Q13416 577 aaPredicted RBP23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 GNL2Q13823 731 aaKnown RBP23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 LRCH2Q5VUJ6 765 aa23.83■■□□□ 1.41
SHCBP1-205ENST00000566016 IGKV6D-21A0A0A0MT36 114 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 H3BQV1 296 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 GAS7O60861 476 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 PRPF38BQ5VTL8 546 aaKnown RBP23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 LARP1BQ659C4 914 aaKnown RBP23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 TRIM50Q86XT4 487 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 SMARCAD1Q9H4L7 1026 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 ERAP1Q9NZ08 941 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 PRKAG2Q9UGJ0 569 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 TBX21Q9UL17 535 aa23.82■■□□□ 1.4
SHCBP1-205ENST00000566016 KIF28PB7ZC32 967 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 H0YGN5 161 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 KIAA0355O15063 1070 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 B4GALT4O60513 344 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 SUPT20HL2P0C7V6 817 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 HOXC8P31273 242 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 ABHD15Q6UXT9 468 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 C7orf31Q8N865 590 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 TEKT3Q9BXF9 490 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 GTF2IRD1Q9UHL9 959 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 WDR64B1ANS9 1081 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 DDX39AO00148 427 aaKnown RBP23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 SLC26A2P50443 739 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 FAM47CQ5HY64 1035 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 B3GNT9Q6UX72 402 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 PLPPR4Q7Z2D5 763 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 RDM1Q8NG50 284 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 AFAP1L1Q8TED9 768 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 PCYT2Q99447 389 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 AZI2Q9H6S1 392 aa23.81■■□□□ 1.4
SHCBP1-205ENST00000566016 SFNP31947 248 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 UTP14CQ5TAP6 766 aaKnown RBP23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 MIS18BP1Q6P0N0 1132 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 POTEDQ86YR6 584 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 SLFN12Q8IYM2 578 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 GLG1Q92896 1179 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 PCDHA10Q9Y5I2 948 aa23.8■■□□□ 1.4
SHCBP1-205ENST00000566016 WNT7AO00755 349 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 NEMFO60524 1076 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 JAK3P52333 1124 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 HAS1Q92839 578 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 UIMC1Q96RL1 719 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 TRPV6Q9H1D0 765 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 TRMT13Q9NUP7 481 aaKnown RBP23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 TMEM39AQ9NV64 488 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 HDAC6Q9UBN7 1215 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 ZMYND8Q9ULU4 1186 aaPredicted RBP23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 NOL7Q9UMY1 257 aaKnown RBP23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 TANC1Q9C0D5 1861 aa23.79■■□□□ 1.4
SHCBP1-205ENST00000566016 TRIM43BA6NCK2 446 aa23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 CHMP4BP1P59074 171 aa23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 PPP2R5CQ13362 524 aa23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 FAM160B1Q5W0V3 765 aa23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 SH3RF1Q7Z6J0 888 aa23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 TRIM43Q96BQ3 446 aaPredicted RBP23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 PRDM5Q9NQX1 630 aaPredicted RBP23.78■■□□□ 1.4
SHCBP1-205ENST00000566016 BAG4O95429 457 aaKnown RBP23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 PSAPP07602 524 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 SMIM10L2AP0DMW4 78 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 SMIM10L2BP0DMW5 78 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 STAT5BP51692 787 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 MCTP1Q6DN14 999 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 GDF6Q6KF10 455 aaPredicted RBP23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 CCDC60Q8IWA6 550 aaPredicted RBP23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 UNC45AQ9H3U1 944 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 DISC1Q9NRI5 854 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 VAV3Q9UKW4 847 aa23.77■■□□□ 1.4
SHCBP1-205ENST00000566016 NRCAMQ92823 1304 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 IGSF9BQ9UPX0 1349 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 SYN1P17600 705 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 CALCRLQ16602 461 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 PTGISQ16647 500 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 TTC38Q5R3I4 469 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms