RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SMCO2A6NFE2 343 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 CTSHP09668 335 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 KCNJ6P48051 423 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 CLK2P49760 499 aaKnown RBP11.48□□□□□ -0.57
CMTM3-209ENST00000565003 ARHGAP4P98171 946 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 PFKFB3Q16875 520 aaPredicted RBP11.48□□□□□ -0.57
CMTM3-209ENST00000565003 SPRED2Q7Z698 418 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 FBXL16Q8N461 479 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 COL25A1Q9BXS0 654 aaPredicted RBP11.48□□□□□ -0.57
CMTM3-209ENST00000565003 ANO3Q9BYT9 981 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 AGXT2Q9BYV1 514 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 OSBPL7Q9BZF2 842 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 PRDM6Q9NQX0 595 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 KCNH7Q9NS40 1196 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 CHD7Q9P2D1 2997 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 CCDC196A0A1B0GTZ2 297 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 ABHD14A-ACY1A0A1B0GW23 586 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 LGR5O75473 907 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 FOSP01100 380 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-209ENST00000565003 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 ARP10275 920 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 SCG2P13521 617 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 IGFBP4P22692 258 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 MARK3P27448 753 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 SREBF1P36956 1147 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 TAP1Q03518 808 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-209ENST00000565003 PKN1Q16512 942 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 SEPT1Q8WYJ6 367 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 CERS4Q9HA82 394 aa11.47□□□□□ -0.57
CMTM3-209ENST00000565003 JPH1Q9HDC5 661 aaPredicted RBP11.47□□□□□ -0.57
CMTM3-209ENST00000565003 VCANP13611 3396 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 NRCAMQ92823 1304 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 KIF28PB7ZC32 967 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 RFXAPO00287 272 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 MAFGO15525 162 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 TLL1O43897 1013 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 PPFIA3O75145 1194 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 CAND2O75155 1236 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 NEFLP07196 543 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 GNAT1P11488 350 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 IKBKEQ14164 716 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 NTRK3Q16288 839 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 CEP55Q53EZ4 464 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 PLEKHG4Q58EX7 1191 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 JAKMIP3Q5VZ66 844 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 CRYGNQ8WXF5 182 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 GLG1Q92896 1179 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 PHKBQ93100 1093 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 PCYT2Q99447 389 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 AGO4Q9HCK5 861 aaKnown RBP11.46□□□□□ -0.57
CMTM3-209ENST00000565003 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 SLC9A2Q9UBY0 812 aa11.46□□□□□ -0.57
CMTM3-209ENST00000565003 MICAL3Q7RTP6 2002 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 NFASCO94856 1347 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 SIP14410 1827 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 FAM86B1E9PN63 330 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 MEIS1O00470 390 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 EFCAB14O75071 495 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 GJB5O95377 273 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 FAM86B2P0C5J1 330 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 PSMA5P28066 241 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 PDIA3P30101 505 aaKnown RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 PPFIA1Q13136 1202 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 ITGB3BPQ13352 177 aaPredicted RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 GRIK4Q16099 956 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 MARCH8Q5T0T0 291 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 ARNTL2Q8WYA1 636 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 SMARCAD1Q9H4L7 1026 aa11.45□□□□□ -0.58
CMTM3-209ENST00000565003 NCOA5Q9HCD5 579 aaKnown RBP11.45□□□□□ -0.58
CMTM3-209ENST00000565003 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 COL4A4P53420 1690 aaPredicted RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 KAT6AQ92794 2004 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 MBLAC1A4D2B0 266 aaPredicted RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 EPB41L2O43491 1005 aaKnown RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 CHRNA1P02708 482 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms