RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.53□□□□□ -1.36
CHD9-210ENST00000564582 MAGI3Q5TCQ9 1506 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 TOPBP1Q92547 1522 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 SHROOM2Q13796 1616 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 WDR7Q9Y4E6 1490 aa6.53□□□□□ -1.36
CHD9-210ENST00000564582 ARHGEF5Q12774 1597 aa6.52□□□□□ -1.36
CHD9-210ENST00000564582 ADCY10Q96PN6 1610 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 TRAV20A0A0B4J274 112 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 HRKO00198 91 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 MEFVO15553 781 aaPredicted RBP6.52□□□□□ -1.37
CHD9-210ENST00000564582 MX1P20591 662 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 GFRA1P56159 465 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 ERVFRD-1P60508 538 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 MVKQ03426 396 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 BICRALQ6AI39 1079 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 CPNE8Q86YQ8 564 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 DEPDC7Q96QD5 511 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 SRPK1Q96SB4 655 aaKnown RBP6.52□□□□□ -1.37
CHD9-210ENST00000564582 ZNF552Q9H707 407 aaPredicted RBP6.52□□□□□ -1.37
CHD9-210ENST00000564582 KCND1Q9NSA2 647 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 NEURL4Q96JN8 1562 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 CROCC2H7BZ55 1655 aa6.52□□□□□ -1.37
CHD9-210ENST00000564582 C9orf84Q5VXU9 1444 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 LRRIQ1Q96JM4 1722 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 MYO1BO43795 1136 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 PEX10O60683 326 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 IVLP07476 585 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 SSRP1Q08945 709 aaKnown RBP6.51□□□□□ -1.37
CHD9-210ENST00000564582 MAP4K2Q12851 820 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 NR1I3Q14994 352 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 NFE2L2Q16236 605 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 ACBD5Q5T8D3 534 aaPredicted RBP6.51□□□□□ -1.37
CHD9-210ENST00000564582 TMEM132EQ6IEE7 984 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 SKAP1Q86WV1 359 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 PPIL6Q8IXY8 311 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 LZTR1Q8N653 840 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
CHD9-210ENST00000564582 NPLOC4Q8TAT6 608 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 FRS2Q8WU20 508 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 DIO2Q92813 273 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 IL17RAQ96F46 866 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 ERO1AQ96HE7 468 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 IER2Q9BTL4 223 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 UTP14AQ9BVJ6 771 aaKnown RBP6.51□□□□□ -1.37
CHD9-210ENST00000564582 SPATA9Q9BWV2 254 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 TNFRSF12AQ9NP84 129 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 IFT140Q96RY7 1462 aa6.51□□□□□ -1.37
CHD9-210ENST00000564582 CDK13Q14004 1512 aaKnown RBP6.5□□□□□ -1.37
CHD9-210ENST00000564582 GPATCH8Q9UKJ3 1502 aaKnown RBP6.5□□□□□ -1.37
CHD9-210ENST00000564582 DISP3Q9P2K9 1392 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 SYCE3A1L190 88 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 C7orf72A4D263 438 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 KIF1CO43896 1103 aaKnown RBP6.5□□□□□ -1.37
CHD9-210ENST00000564582 ADCY5O95622 1261 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 EFEMP2O95967 443 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 TUBBP07437 444 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 CCDC192P0DO97 292 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 FGFR1P11362 822 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 USP8P40818 1118 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 GTF2A2P52657 109 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 UBE2HP62256 183 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 KIR3DS1Q14943 382 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 ATP2B3Q16720 1220 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 DPH6Q7L8W6 267 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 TMEM145Q8NBT3 493 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 KIF18AQ8NI77 898 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 NOL10Q9BSC4 688 aaKnown RBP6.5□□□□□ -1.37
CHD9-210ENST00000564582 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 PSD3Q9NYI0 1048 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD9-210ENST00000564582 FAM135AQ9P2D6 1515 aa6.5□□□□□ -1.37
CHD9-210ENST00000564582 PLA2R1Q13018 1463 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 PLEKHD1A6NEE1 506 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 NUDT19A8MXV4 375 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 SEMA7AO75326 666 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 CYBBP04839 570 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 MSL3P1P0C860 447 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 TACR1P25103 407 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 CYP2C19P33261 490 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 LTBRP36941 435 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 RPL11P62913 178 aaKnown RBP6.49□□□□□ -1.37
CHD9-210ENST00000564582 CUL4AQ13619 759 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 RASA3Q14644 834 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 SF1Q15637 639 aaKnown RBP6.49□□□□□ -1.37
CHD9-210ENST00000564582 JAKMIP3Q5VZ66 844 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 PAQR3Q6TCH7 311 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 NSMFQ6X4W1 530 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 SPATC1Q76KD6 591 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 ITPRIPQ8IWB1 547 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 DEF6Q9H4E7 631 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 SMC4Q9NTJ3 1288 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 RBM28Q9NW13 759 aaKnown RBP6.49□□□□□ -1.37
CHD9-210ENST00000564582 GULP1Q9UBP9 304 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms