RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CCDC188H7C350 402 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 BIRC2Q13490 618 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 RUNDC3BQ96NL0 473 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
COMMD4-209ENST00000564068 ZC3H13Q5T200 1668 aaKnown RBP13.71□□□□□ -0.22
COMMD4-209ENST00000564068 FAM107AO95990 144 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 PDHA1P08559 390 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 STAG2Q8N3U4 1231 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 PIGSQ96S52 555 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 SYNCQ9H7C4 482 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 PASKQ96RG2 1323 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.22
COMMD4-209ENST00000564068 MEIS1O00470 390 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
COMMD4-209ENST00000564068 ALX1Q15699 326 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 PFKFB3Q16875 520 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-209ENST00000564068 USP37Q86T82 979 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 MMGT1Q8N4V1 131 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 SEC16BQ96JE7 1060 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 PDE6CP51160 858 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 ATP8A2Q9NTI2 1148 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 RAD51CO43502 376 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
COMMD4-209ENST00000564068 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
COMMD4-209ENST00000564068 GCNT4Q9P109 453 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 STK17AQ9UEE5 414 aa13.7□□□□□ -0.22
COMMD4-209ENST00000564068 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
COMMD4-209ENST00000564068 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 CAPRIN2Q6IMN6 1127 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 UTYO14607 1347 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 HERVK_113P62684 666 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 CLUL1Q15846 466 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 C6orf118Q5T5N4 469 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PAPD7Q5XG87 772 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 MDM1Q8TC05 714 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 LRRC8CQ8TDW0 803 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 TRIM9Q9C026 710 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 CEP72Q9P209 647 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 POLD1P28340 1107 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 CDKAL1Q5VV42 579 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PIGBQ92521 554 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 DDX23Q9BUQ8 820 aaKnown RBP13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PHF20Q9BVI0 1012 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 ARHGEF35A5YM69 484 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 FERP16591 822 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 IL9RQ01113 521 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 CYB5D1Q6P9G0 228 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 KIFAP3Q92845 792 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 SGSM3Q96HU1 749 aa13.69□□□□□ -0.22
COMMD4-209ENST00000564068 XDHP47989 1333 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 ATP2A2P16615 1042 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 CFAP61Q8NHU2 1237 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 LBHD1Q9BQE6 289 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 TTI1O43156 1089 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 SYF2O95926 243 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 LMNB1P20700 586 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 MYOM1P52179 1685 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 C1orf167Q5SNV9 1468 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 ATF2P15336 505 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 SP4Q02446 784 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 NBPF3Q9H094 633 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 BAZ2BQ9UIF8 2168 aaKnown RBP13.68□□□□□ -0.22
COMMD4-209ENST00000564068 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
COMMD4-209ENST00000564068 WDR91A4D1P6 747 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms