RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 TCTN1Q2MV58 587 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 TMCO2Q7Z6W1 182 aaPredicted RBP9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 VSIG10LQ86VR7 867 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 RILPL2Q969X0 211 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 MRPL38Q96DV4 380 aaKnown RBP9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 SPATA33Q96N06 139 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 PDCD2LQ9BRP1 358 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 ANP32EQ9BTT0 268 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 DSCC1Q9BVC3 393 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 OSBPL3Q9H4L5 887 aa9.51□□□□□ -0.89
PDXDC1-208ENST00000563522 RSPH10B2B2RC85 870 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 B4E1Z4 1266 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 SMAPO00193 183 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 ZBTB5O15062 677 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 RSPH10BP0C881 870 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 CCND2P30279 289 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 TIGD5Q53EQ6 642 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 PLEKHG4Q58EX7 1191 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 FAM178BQ8IXR5 827 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 WNT8BQ93098 351 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 C16orf70Q9BSU1 422 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 LNPKQ9C0E8 428 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 VAT1LQ9HCJ6 419 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 C11orf16Q9NQ32 467 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 DIAPH3Q9NSV4 1193 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 MTUS1Q9ULD2 1270 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
PDXDC1-208ENST00000563522 C17orf102A2RUQ5 167 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 KLRF2D3W0D1 207 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 H3BRB1 525 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 STAM2O75886 525 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 GGPS1O95749 300 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 POLR2MP0CAP2 368 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 GNAT1P11488 350 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 MYCLP12524 364 aaPredicted RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 UBA1P22314 1058 aaKnown RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 THPOP40225 353 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 ZNF200P98182 395 aaPredicted RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 COL19A1Q14993 1142 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 PGM5Q15124 567 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 HSDL1Q3SXM5 330 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 CWC27Q6UX04 472 aaKnown RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 NYAP1Q6ZVC0 841 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 SMC5Q8IY18 1101 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 GJD3Q8N144 294 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 DBF4BQ8NFT6 615 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 SEPT8Q92599 483 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 ATP6V0A1Q93050 837 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 TUT1Q9H6E5 874 aaKnown RBP9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 FAM50BQ9Y247 325 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 TET1Q8NFU7 2136 aa9.49□□□□□ -0.89
PDXDC1-208ENST00000563522 COL4A4P53420 1690 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 COL4A6Q14031 1691 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PALM3A6NDB9 673 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 H3BNC9 293 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PPP1R11O60927 126 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 ALADP13716 330 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 KCNA5P22460 613 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 SP2Q02086 613 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 HIC1Q14526 733 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 SEC23AQ15436 765 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 GNPTABQ3T906 1256 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 EPC2Q52LR7 807 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 FAM117BQ6P1L5 589 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 CHD1LQ86WJ1 897 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 MYOCDQ8IZQ8 938 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 STAG2Q8N3U4 1231 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 NEK9Q8TD19 979 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 APBB2Q92870 758 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 TOP1MTQ969P6 601 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 INPP4AQ96PE3 977 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 C17orf80Q9BSJ5 609 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 MLXIPQ9HAP2 919 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 CD320Q9NPF0 282 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 MAD2L2Q9UI95 211 aa9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 TCF20Q9UGU0 1960 aaKnown RBP9.48□□□□□ -0.89
PDXDC1-208ENST00000563522 PNMA6FA0A0J9YX94 578 aa9.47□□□□□ -0.89
PDXDC1-208ENST00000563522 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
PDXDC1-208ENST00000563522 NCK2O43639 380 aa9.47□□□□□ -0.89
PDXDC1-208ENST00000563522 LGALS2P05162 132 aa9.47□□□□□ -0.89
PDXDC1-208ENST00000563522 HOXA13P31271 388 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms